RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 DIO3P55073 304 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 OCRLQ01968 901 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 EMX2Q04743 252 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 LASP1Q14847 261 aaKnown RBP14.21□□□□□ -0.13
HDAC4-213ENST00000496347 OR2A2Q6IF42 318 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 BHLHB9Q6PI77 547 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 CHMP1BQ7LBR1 199 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 KRTCAP2Q8N6L1 136 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 DUSP19Q8WTR2 217 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 FAM222BQ8WU58 562 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 PIGMQ9H3S5 423 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 UBQLN4Q9NRR5 601 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 CRIM1Q9NZV1 1036 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 AP4B1Q9Y6B7 739 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 A0A1W2PQD3 144 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 OR2M5A3KFT3 312 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 WDR91A4D1P6 747 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 C7orf72A4D263 438 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 SLC22A20A6NK97 555 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 SCDO00767 359 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 NDUFB5O43674 189 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 ITM2AO43736 263 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 C6orf47O95873 294 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 CRHP06850 196 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 G6PDP11413 515 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 FCGR2AP12318 317 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 RPL14P50914 215 aaKnown RBP14.2□□□□□ -0.14
HDAC4-213ENST00000496347 CLDN8P56748 225 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 POU6F2P78424 691 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-213ENST00000496347 TP53BP2Q13625 1128 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 TMEM44Q2T9K0 475 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 SPDYE7PQ495Y7 208 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 CDC73Q6P1J9 531 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 APOOLQ6UXV4 268 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 ACTRT2Q8TDY3 377 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 SORT1Q99523 831 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 DUSP26Q9BV47 211 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 ACTRT3Q9BYD9 372 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 PIGUQ9H490 435 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 GPATCH2Q9NW75 528 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 STOML1Q9UBI4 398 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 FAF1Q9UNN5 650 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-213ENST00000496347 ZNF175Q9Y473 711 aa14.2□□□□□ -0.14
HDAC4-213ENST00000496347 MAP1AP78559 2803 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-213ENST00000496347 MTORP42345 2549 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 H3BML4 177 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 CTAG2O75638 210 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 GOSR1O95249 250 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 ATP6V1C1P21283 382 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 SLC1A6P48664 564 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 CCT3P49368 545 aaKnown RBP14.19□□□□□ -0.14
HDAC4-213ENST00000496347 ZNF41P51814 821 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-213ENST00000496347 FOXF2Q12947 444 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 FGFBP1Q14512 234 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 P4HA3Q7Z4N8 544 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 UBQLNLQ8IYU4 475 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 GCNT2Q8N0V5 402 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 METTL25Q8N6Q8 603 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 ZNF527Q8NB42 609 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 OR4C3Q8NH37 302 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 CDS1Q92903 461 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 ZBTB8AQ96BR9 441 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 INTS12Q96CB8 462 aaKnown RBP14.19□□□□□ -0.14
HDAC4-213ENST00000496347 CXorf36Q9H7Y0 433 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 ITPR3Q14573 2671 aa14.19□□□□□ -0.14
HDAC4-213ENST00000496347 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 A0A1W2PNV4 684 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 TUBAL3A6NHL2 446 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 RNASET2O00584 256 aaKnown RBP14.18□□□□□ -0.14
HDAC4-213ENST00000496347 TNFRSF21O75509 655 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 TNFSF13O75888 250 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 BGNP21810 368 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 CPA2P48052 419 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 HBA1P69905 142 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 DPY19L1Q2PZI1 675 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 CCNJQ5T5M9 372 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 MTERF4Q7Z6M4 381 aaKnown RBP14.18□□□□□ -0.14
HDAC4-213ENST00000496347 ZAR1Q86SH2 424 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 GTPBP8Q8N3Z3 284 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-213ENST00000496347 OR8J2Q8NGG1 315 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 OTUB1Q96FW1 271 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-213ENST00000496347 CHMP6Q96FZ7 201 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 C20orf27Q9GZN8 174 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 HOXD1Q9GZZ0 328 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 AKTIPQ9H8T0 292 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 KCNK9Q9NPC2 374 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 GALNT8Q9NY28 637 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 ZNF337Q9Y3M9 751 aa14.18□□□□□ -0.14
HDAC4-213ENST00000496347 A6NNC1 897 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 CFLARO15519 480 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 SEC14L5O43304 696 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 ERLIN1O75477 346 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 TGM6O95932 706 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms