RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	ASPHD1	Q5U4P2	390 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PRMT9	Q6P2P2	845 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	CNST	Q6PJW8	725 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	XKRX	Q6PP77	449 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	FIGLA	Q6QHK4	219 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TMEM205	Q6UW68	189 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981		Q6ZPB1	254 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	LANCL3	Q6ZV70	420 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TAS2R42	Q7RTR8	314 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PRSS41	Q7RTY9	318 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	VN1R4	Q7Z5H5	301 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PRUNE1	Q86TP1	453 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	SERPINA11	Q86U17	422 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	LDB1	Q86U70	411 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	HOOK3	Q86VS8	718 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PAQR7	Q86WK9	346 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TMEM139	Q8IV31	216 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	UEVLD	Q8IX04	471 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PALM2	Q8IXS6	379 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PRSS58	Q8IYP2	241 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	CSNK1A1L	Q8N752	337 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TTC29	Q8NA56	475 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	CAMKV	Q8NCB2	501 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	OR10S1	Q8NGN2	331 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PEX13	Q92968	403 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	FBXL8	Q96CD0	374 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	SCMH1	Q96GD3	660 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	CABS1	Q96KC9	395 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	IMMP1L	Q96LU5	166 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	BIRC8	Q96P09	236 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	OR2A5	Q96R48	311 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TRIM51	Q9BSJ1	452 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	ABHD6	Q9BV23	337 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	HES7	Q9BYE0	225 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	SLCO5A1	Q9H2Y9	848 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	MOV10	Q9HCE1	1003 aa	Known RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	SPAG4	Q9NPE6	437 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	ZNHIT6	Q9NWK9	470 aa	Known RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	PTGFRN	Q9P2B2	879 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	STOX2	Q9P2F5	926 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	ZNF835	Q9Y2P0	537 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	TSC22D4	Q9Y3Q8	395 aa		3.91	□□□□□ -1.78
VPS52-222	ENST00000495981	NSG1	A0A0A6YYJ2	146 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981		A0A0J9YVX5	310 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ERI2	A8K979	691 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	FOXO6	A8MYZ6	492 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	KDM4E	B2RXH2	506 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	TARM1	B6A8C7	271 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	POC1B-GALNT4	F8VUJ3	575 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981		H0YGG7	62 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ADAM10	O14672	748 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PRMT5	O14744	637 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	HAT1	O14929	419 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	NIPSNAP2	O75323	286 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PSIP1	O75475	530 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	RPN2	P04844	631 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	TPM3	P06753	285 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	CYC1	P08574	325 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	F7	P08709	466 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	OR56A5	P0C7T3	313 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PCNA	P12004	261 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	EZR	P15311	586 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	RPS3	P23396	243 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PTGS2	P35354	604 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	MAGEA1	P43355	309 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ADAR	P55265	1226 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	CDH13	P55290	713 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	RWDD2B	P57060	319 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ARG2	P78540	354 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	CRADD	P78560	199 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	MAT1A	Q00266	395 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	SORD	Q00796	357 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	TFF3	Q07654	80 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	CDH17	Q12864	832 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	NAE1	Q13564	534 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	KCNJ11	Q14654	390 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	TMED2	Q15363	201 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	SIX1	Q15475	284 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	NHSL2	Q5HYW2	709 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	C6orf163	Q5TEZ5	329 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	IRAK1BP1	Q5VVH5	260 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	TMEM211	Q6ICI0	200 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	H3F3C	Q6NXT2	135 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	AAGAB	Q6PD74	315 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	GFRAL	Q6UXV0	394 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	RAD9B	Q6WBX8	426 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PQLC2	Q6ZP29	291 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	NDUFAF7	Q7L592	441 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ZNF595	Q8IYB9	648 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	BEST3	Q8N1M1	668 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	MARVELD2	Q8N4S9	558 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	PARP16	Q8N5Y8	322 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	SETD6	Q8TBK2	473 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ASZ1	Q8WWH4	475 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	HAS2	Q92819	552 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	RNF183	Q96D59	192 aa		3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	ZC3HAV1L	Q96H79	300 aa	Known RBP	3.9	□□□□□ -1.79
VPS52-222	ENST00000495981	GPR137	Q96N19	417 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms