RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ADSLP30566 484 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 ANXA11P50995 505 aaKnown RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 CYLC2Q14093 348 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 MAPRE2Q15555 327 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 MAPK14Q16539 360 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 MMEL1Q495T6 779 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 KLHL26Q53HC5 615 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 WIPI1Q5MNZ9 446 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 PDZK1Q5T2W1 519 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 TRILQ7L0X0 811 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 FAM83FQ8NEG4 500 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 OR2M3Q8NG83 312 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 SH3YL1Q96HL8 342 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 CGREF1Q99674 301 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 KLHDC3Q9BQ90 382 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 CPPED1Q9BRF8 314 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 HOXD1Q9GZZ0 328 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 QRSL1Q9H0R6 528 aaKnown RBP17.69■□□□□ 0.42
HDAC4-212ENST00000495497 EXO5Q9H790 373 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 QPCTLQ9NXS2 382 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 SLC6A5Q9Y345 797 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 WDR45Q9Y484 360 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 NCKAP5O14513 1909 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 NBASA2RRP1 2371 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 TRGV5A0A0B4J1U4 118 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 A0A1W2PQD3 144 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 MRASO14807 208 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SLC22A2O15244 555 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 OIP5O43482 229 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 TNFRSF21O75509 655 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 HPNP05981 417 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 ENDOUP21128 410 aaKnown RBP17.68■□□□□ 0.42
HDAC4-212ENST00000495497 MTPNP58546 118 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 TXNL4AP83876 142 aaKnown RBP17.68■□□□□ 0.42
HDAC4-212ENST00000495497 C17orf67Q0P5P2 114 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 NDUFAF6Q330K2 333 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF619Q8N2I2 560 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 FADS6Q8N9I5 356 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 PHOSPHO1Q8TCT1 267 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 MAL2Q969L2 176 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 ANKRD27Q96NW4 1050 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 TRNT1Q96Q11 434 aaKnown RBP17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SLC39A3Q9BRY0 314 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SAP130Q9H0E3 1048 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SLC38A1Q9H2H9 487 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 RAD21L1Q9H4I0 556 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 ACKR4Q9NPB9 350 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SPRR3Q9UBC9 169 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 SH3BGRL2Q9UJC5 107 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 LIPT1Q9Y234 373 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 DTNAQ9Y4J8 743 aa17.68■□□□□ 0.42
HDAC4-212ENST00000495497 A0A1B0GVC2 190 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 NPIPA2E9PIF3 369 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 NPIPA3F8WFD2 350 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 KIAA0513O60268 411 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 SHOX2O60902 331 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-212ENST00000495497 BCHEP06276 602 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 TFPTP0C1Z6 253 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 COX4I1P13073 169 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 ABOP16442 354 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 HPCAP84074 193 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 RBPJQ06330 500 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF141Q15928 474 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 RPS26P11Q5JNZ5 115 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-212ENST00000495497 C1QL3Q5VWW1 255 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 ARHGAP11AQ6P4F7 1023 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 LRRC74BQ6ZQY2 392 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF527Q8NB42 609 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 SLC38A5Q8WUX1 472 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 RCN3Q96D15 328 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 TMEM19Q96HH6 336 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 POLE3Q9NRF9 147 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 P2RX2Q9UBL9 471 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 DKKL1Q9UK85 242 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 RPH3AQ9Y2J0 694 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-212ENST00000495497 ARL2BPQ9Y2Y0 163 aa17.67■□□□□ 0.42
HDAC4-212ENST00000495497 SVILO95425 2214 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 TRGV8A0A0C4DH27 118 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 BBIP1A8MTZ0 92 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 EVPLLA8MZ36 301 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 ZIC3O60481 467 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 SLC19A2O60779 497 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 PPIBP23284 216 aaKnown RBP17.66■□□□□ 0.42
HDAC4-212ENST00000495497 DPP4P27487 766 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 SRD5A2P31213 254 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 PTGS2P35354 604 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 MAGEA8P43361 318 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF117Q03924 483 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 FADDQ13158 208 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 C3AR1Q16581 482 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 TRMT5Q32P41 509 aaKnown RBP17.66■□□□□ 0.42
HDAC4-212ENST00000495497 OR14L1PQ8NHC6 308 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 RP9Q8TA86 221 aaKnown RBP17.66■□□□□ 0.42
HDAC4-212ENST00000495497 NEIL3Q8TAT5 605 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 THUMPD3Q9BV44 507 aaKnown RBP17.66■□□□□ 0.42
HDAC4-212ENST00000495497 OR2B2Q9GZK3 357 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 CARD8Q9Y2G2 431 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF835Q9Y2P0 537 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 GMEB1Q9Y692 573 aa17.66■□□□□ 0.42
HDAC4-212ENST00000495497 IGLV3-32A0A0A0MS00 114 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms