RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HLCSP50747 726 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 SNRPNP63162 240 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 RPP38P78345 283 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 BTG2P78543 158 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 DCDP81605 110 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TEKQ02763 1124 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ERV3-1Q14264 604 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 MINDY4Q4G0A6 757 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 BROXQ5VW32 411 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TSEN54Q7Z6J9 526 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CDK20Q8IZL9 346 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 SLC5A8Q8N695 610 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 AQP11Q8NBQ7 271 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 MORN4Q8NDC4 146 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 RCBTB1Q8NDN9 531 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF248Q8NDW4 579 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PLPP5Q8NEB5 264 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 GNPDA2Q8TDQ7 276 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 METTL21AQ8WXB1 218 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF566Q969W8 418 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 OR6C1Q96RD1 312 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PITX2Q99697 317 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 MCHR1Q99705 422 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ZNF559Q9BR84 538 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 DGCR6LQ9BY27 220 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ANKRA2Q9H9E1 313 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TMEM27Q9HBJ8 222 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 IMPAD1Q9NX62 359 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 SELENONQ9NZV5 590 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TMEM9Q9P0T7 183 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 DHCR7Q9UBM7 475 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PISDQ9UG56 409 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TESQ9UGI8 421 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 NDRG4Q9ULP0 352 aaKnown RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CBLCQ9ULV8 474 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 ERVK-19Q9WJR5 959 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 TMEM184BQ9Y519 407 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-214ENST00000495485 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CACNA1GO43497 2377 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
HDAC3-214ENST00000495485 CELSR3Q9NYQ7 3312 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ZFHX4Q86UP3 3567 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SPTA1P02549 2419 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 MYOCOSA0A1B0GUC4 107 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SH3PXD2BA1X283 911 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 PRAMEF25A6NGN4 478 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 M0R3H8 397 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 RRP8O43159 456 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 FCMRO60667 390 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SCRG1O75711 98 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 CYP7B1O75881 506 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 KCNK2O95069 426 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 MED26O95402 600 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ANGPTL1O95841 491 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 KLK3P07288 261 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 LIPCP11150 499 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 OSMP13725 252 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 HPGDP15428 266 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 S1PR1P21453 382 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 CBLP22681 906 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ELAVL4P26378 380 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 GGT2P36268 569 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 PIGAP37287 484 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 PPICP45877 212 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 CRISP1P54107 249 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 UCNP55089 124 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ALDH6A1Q02252 535 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 NSDHLQ15738 373 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SYT16Q17RD7 645 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 CD300LDQ6UXZ3 194 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SLC29A4Q7RTT9 530 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 VRK2Q86Y07 508 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 GRAMD2AQ8IUY3 354 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 RNF113BQ8IZP6 322 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ESX1Q8N693 406 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 METTL27Q8N6F8 245 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 PIGXQ8TBF5 258 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 ADAMTS16Q8TE57 1224 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 DGCR14Q96DF8 476 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SENP5Q96HI0 755 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 HS6ST2Q96MM7 605 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 Q96MT0 163 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 NECTIN3Q9NQS3 549 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 LANCL2Q9NS86 450 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 C19orf25Q9UFG5 118 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 GPN3Q9UHW5 284 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 NXT1Q9UKK6 140 aaKnown RBP9.5□□□□□ -0.89
HDAC3-214ENST00000495485 A4GNTQ9UNA3 340 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 SLC35A3Q9Y2D2 325 aa9.5□□□□□ -0.89
HDAC3-214ENST00000495485 FAM208BQ5VWN6 2430 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 IGKV3D-11A0A0A0MRZ8 115 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 TCRBV16S1A1N1A0A5B0 115 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 TRAPPC13A5PLN9 417 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 TRIM64A6NGJ6 449 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 SNTNA6NMZ2 147 aa9.49□□□□□ -0.89
HDAC3-214ENST00000495485 NOL3O60936 208 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms