RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CEP70Q8NHQ1 597 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 ZFP28Q8NHY6 868 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 PPP1R14CQ8TAE6 165 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 SLC9A6Q92581 669 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 CIDECQ96AQ7 238 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-203ENST00000494993 PERPQ96FX8 193 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 GMPPAQ96IJ6 420 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-203ENST00000494993 LRTM1Q9HBL6 345 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 HHATLQ9HCP6 504 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 PLSCR4Q9NRQ2 329 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 C1orf109Q9NX04 203 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 PAQR5Q9NXK6 330 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-203ENST00000494993 PTGDR2Q9Y5Y4 395 aa19.8■□□□□ 0.76
HDDC3-203ENST00000494993 USF3Q68DE3 2245 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 ZANQ9Y493 2812 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 A0A087WZY1 265 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 SLC28A1O00337 649 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 TBX19O60806 448 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 PLGP00747 810 aaPredicted RBP19.79■□□□□ 0.76
HDDC3-203ENST00000494993 NGFRP08138 427 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 PRKAG1P54619 331 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDDC3-203ENST00000494993 ZNF385BQ569K4 471 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 GALNT10Q86SR1 603 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 WDR75Q8IWA0 830 aaKnown RBP19.79■□□□□ 0.76
HDDC3-203ENST00000494993 GTPBP8Q8N3Z3 284 aaPredicted RBP19.79■□□□□ 0.76
HDDC3-203ENST00000494993 OR4C3Q8NH37 302 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 OR10D3Q8NH80 312 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 ADGRG7Q96K78 797 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 NPAS1Q99742 590 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 CCT7Q99832 543 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 BDH2Q9BUT1 245 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 IQCGQ9H095 443 aaKnown RBP19.79■□□□□ 0.76
HDDC3-203ENST00000494993 OXSMQ9NWU1 459 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 NTMQ9P121 344 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 CLEC4AQ9UMR7 237 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 DNHD1Q96M86 4753 aa19.79■□□□□ 0.76
HDDC3-203ENST00000494993 CSPG4Q6UVK1 2322 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 RGS14O43566 566 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 SS18L1O75177 396 aaPredicted RBP19.78■□□□□ 0.76
HDDC3-203ENST00000494993 THBDP07204 575 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 ACP2P11117 423 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 PPP3CBP16298 524 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 IL11P20809 199 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 FRKP42685 505 aaPredicted RBP19.78■□□□□ 0.76
HDDC3-203ENST00000494993 CCT5P48643 541 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 CTBP2P56545 445 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 CTU2Q2VPK5 515 aaKnown RBP19.78■□□□□ 0.76
HDDC3-203ENST00000494993 BEX5Q5H9J7 111 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 CEP112Q8N8E3 955 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 GATSQ8NAP1 163 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 FBXO30Q8TB52 745 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 FAM110BQ8TC76 370 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 PPCDCQ96CD2 204 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 GIMAP5Q96F15 307 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 ZBED6CLQ96FA7 236 aaPredicted RBP19.78■□□□□ 0.76
HDDC3-203ENST00000494993 FCRL1Q96LA6 429 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 MS4A4EQ96PG1 132 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 REEP4Q9H6H4 257 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 MCTS1Q9ULC4 181 aaKnown RBP19.78■□□□□ 0.76
HDDC3-203ENST00000494993 JMJD1CQ15652 2540 aa19.78■□□□□ 0.76
HDDC3-203ENST00000494993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.77■□□□□ 0.76
HDDC3-203ENST00000494993 C7orf72A4D263 438 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 AKAP10O43572 662 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 CXCL13O43927 109 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 KCNK2O95069 426 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 CPA3P15088 417 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 SDC1P18827 310 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 MANFP55145 182 aaKnown RBP19.77■□□□□ 0.76
HDDC3-203ENST00000494993 RAC1P63000 192 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 SLC18A2Q05940 514 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 PLPPR5Q32ZL2 321 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 LIPMQ5VYY2 423 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 FIGNL1Q6PIW4 674 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 STAC2Q6ZMT1 411 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 SZRD1Q7Z422 152 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 ZAR1Q86SH2 424 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 CCDC63Q8NA47 563 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 OR6Y1Q8NGX8 325 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 OR2T11Q8NH01 316 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 ACTRT2Q8TDY3 377 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 ZBTB8AQ96BR9 441 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 TSSK3Q96PN8 268 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 GSX2Q9BZM3 304 aa19.77■□□□□ 0.76
HDDC3-203ENST00000494993 C12orf65Q9H3J6 166 aaKnown RBP19.77■□□□□ 0.76
HDDC3-203ENST00000494993 HIVEP2P31629 2446 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 A0A1W2PRB8 838 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 ADAMDEC1O15204 470 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 KLF4O43474 513 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 SYNGR4O95473 234 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 OPN1LWP04000 364 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 NEFHP12036 1026 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 PSMA4P25789 261 aaKnown RBP19.76■□□□□ 0.75
HDDC3-203ENST00000494993 CRHR1P34998 444 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 PTH2RP49190 550 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 ZNF41P51814 821 aaPredicted RBP19.76■□□□□ 0.75
HDDC3-203ENST00000494993 PDE7AQ13946 482 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 DUSP5Q16690 384 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 MFSD12Q6NUT3 480 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms