RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GTPBP8Q8N3Z3 284 aaPredicted RBP20.84■□□□□ 0.93
COL27A1-208ENST00000494780 NUP43Q8NFH3 380 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 ZBED6CLQ96FA7 236 aaPredicted RBP20.84■□□□□ 0.93
COL27A1-208ENST00000494780 FCRL1Q96LA6 429 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 CCT7Q99832 543 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 BDH2Q9BUT1 245 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 REEP4Q9H6H4 257 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 C7orf72A4D263 438 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 SS18L1O75177 396 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 OXSR1O95747 527 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 PLGP00747 810 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CPA3P15088 417 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 LCN1P31025 176 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CRHR1P34998 444 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 PRKAG1P54619 331 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CTBP2P56545 445 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 EXOC3L2Q2M3D2 409 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 ANKRD34AQ69YU3 496 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CLEC6AQ6EIG7 209 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 ANKRD26P1Q6NSI1 321 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 PPP4R4Q6NUP7 873 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 YTHDF3Q7Z739 585 aaKnown RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 OR6Y1Q8NGX8 325 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 OR4C3Q8NH37 302 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 OR10D3Q8NH80 312 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 FAM110BQ8TC76 370 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 ACTRT2Q8TDY3 377 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 SLC9A6Q92581 669 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 CIDECQ96AQ7 238 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 ZBTB8AQ96BR9 441 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 PPCDCQ96CD2 204 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 GIMAP5Q96F15 307 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 ADGRG7Q96K78 797 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 Q96MF0 132 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 FANCFQ9NPI8 374 aa20.83■□□□□ 0.93
COL27A1-208ENST00000494780 MCTS1Q9ULC4 181 aaKnown RBP20.83■□□□□ 0.93
COL27A1-208ENST00000494780 H7C1Q1 480 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 KIF2AO00139 706 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-208ENST00000494780 LY6G6DO95868 133 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 ACP2P11117 423 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 NEFHP12036 1026 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 FRKP42685 505 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-208ENST00000494780 MANFP55145 182 aaKnown RBP20.82■□□□□ 0.92
COL27A1-208ENST00000494780 RAC1P63000 192 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 CTU2Q2VPK5 515 aaKnown RBP20.82■□□□□ 0.92
COL27A1-208ENST00000494780 ZNF385BQ569K4 471 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 BEX5Q5H9J7 111 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 LIPMQ5VYY2 423 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 RNF165Q6ZSG1 346 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 CCDC63Q8NA47 563 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 PPP1R14CQ8TAE6 165 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 MS4A4EQ96PG1 132 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 GLRX2Q9NS18 164 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 ACSS1Q9NUB1 689 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-208ENST00000494780 PTGDR2Q9Y5Y4 395 aa20.82■□□□□ 0.92
COL27A1-208ENST00000494780 RAI1Q7Z5J4 1906 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-208ENST00000494780 A0A1W2PRB8 838 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 AZIN1O14977 448 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 ADAMDEC1O15204 470 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 AKAP10O43572 662 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 KCNK2O95069 426 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 SYNGR4O95473 234 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 THBDP07204 575 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 SDC1P18827 310 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 ZNF41P51814 821 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-208ENST00000494780 SLC18A2Q05940 514 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 PDE7AQ13946 482 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 CPTPQ5TA50 214 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 ZCCHC12Q6PEW1 402 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 Q6ZSR9 355 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 GALNT10Q86SR1 603 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 MISPQ8IVT2 679 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 SLC16A11Q8NCK7 471 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 PERPQ96FX8 193 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 TSSK3Q96PN8 268 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 RHOXF2Q9BQY4 288 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 GSX2Q9BZM3 304 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 MED17Q9NVC6 651 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 SH3BP4Q9P0V3 963 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 CLEC4AQ9UMR7 237 aa20.81■□□□□ 0.92
COL27A1-208ENST00000494780 KLF4O43474 513 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 CXCL13O43927 109 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 PSMA4P25789 261 aaKnown RBP20.8■□□□□ 0.92
COL27A1-208ENST00000494780 PLPPR5Q32ZL2 321 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 MFSD12Q6NUT3 480 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 FIGNL1Q6PIW4 674 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 STAC2Q6ZMT1 411 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 ESPNLQ6ZVH7 1005 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 PLEKHM3Q6ZWE6 761 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 SZRD1Q7Z422 152 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 HOMEZQ8IX15 550 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 CIARTQ8N365 385 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-208ENST00000494780 GATSQ8NAP1 163 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 OR2T11Q8NH01 316 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 OR2V1Q8NHB1 315 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 KIF18AQ8NI77 898 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 FBXO30Q8TB52 745 aa20.8■□□□□ 0.92
COL27A1-208ENST00000494780 RNF145Q96MT1 663 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms