RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SLC2A6Q9UGQ3 507 aa3.4□□□□□ -1.87
SMC4-224ENST00000494612 ANKRD50Q9ULJ7 1429 aa3.4□□□□□ -1.87
SMC4-224ENST00000494612 USP32Q8NFA0 1604 aa3.4□□□□□ -1.87
SMC4-224ENST00000494612 PLCH1Q4KWH8 1693 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 SLIT2O94813 1529 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 ADGRB2O60241 1585 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 VPS8Q8N3P4 1428 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 BICDL2A1A5D9 508 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 G3V3Y1 287 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 H3BTX0 84 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 ALOX15BO15296 676 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 LCMT2O60294 686 aaKnown RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 TOXO94900 526 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 THY1P04216 161 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 LAMP1P11279 417 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 NCF1P14598 390 aaPredicted RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 PTBP1P26599 531 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMC4-224ENST00000494612 CYLC1P35663 651 aaPredicted RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 PTGFRP43088 359 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 MAGEA9P43362 315 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 RPS6P62753 249 aaKnown RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 PPIAP62937 165 aaKnown RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 PAX2Q02962 417 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 HSF2Q03933 536 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 IL18R1Q13478 541 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 ZNF239Q16600 458 aaKnown RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 MICAQ29983 383 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 SLC25A30Q5SVS4 291 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 PAQR9Q6ZVX9 377 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 EFCAB13Q8IY85 973 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 MCOLN2Q8IZK6 566 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 SLC39A11Q8N1S5 342 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 CERS5Q8N5B7 392 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 CD177Q8N6Q3 437 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 CCDC110Q8TBZ0 833 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 TAF4BQ92750 862 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 SLC25A36Q96CQ1 311 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 C1orf147Q96MC9 270 aaPredicted RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 CCSER1Q9C0I3 900 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMC4-224ENST00000494612 ANKMY1Q9P2S6 941 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 ATP6V1HQ9UI12 483 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 BARX2Q9UMQ3 279 aaPredicted RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 FOXJ3Q9UPW0 622 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 AURKCQ9UQB9 309 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 DHRS7Q9Y394 339 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 MTF2Q9Y483 593 aaPredicted RBP3.39□□□□□ -1.87
SMC4-224ENST00000494612 ADGRL2O95490 1459 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 PXDNQ92626 1479 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 NWD2Q9ULI1 1742 aa3.39□□□□□ -1.87
SMC4-224ENST00000494612 PARD3Q8TEW0 1356 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 NCAPD2Q15021 1401 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 RNF222A6NCQ9 220 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 WASHC1A8K0Z3 465 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 WASH3PC4AMC7 463 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 E9PMD0 336 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 SGK494L7N484 410 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 PHOX2AO14813 284 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 PPIHO43447 177 aaKnown RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 SMPD2O60906 423 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 NOL4O94818 638 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 TRIM16O95361 564 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 SNRPCP09234 159 aaKnown RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 PGAM2P15259 253 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 SDC1P18827 310 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 IL2RGP31785 369 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 ACVR1BP36896 505 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 TRPC1P48995 793 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 STK19P49842 368 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 METAP1P53582 386 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 PRKCEQ02156 737 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 DPYSQ14117 519 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 TMEM52BQ4KMG9 183 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 ATAD3CQ5T2N8 411 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 C12orf60Q5U649 245 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 MARC1Q5VT66 337 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 WASH2PQ6VEQ5 465 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 FAM43BQ6ZT52 329 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 CYS1Q717R9 158 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 ADCK1Q86TW2 530 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 PARGQ86W56 976 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 NFAM1Q8NET5 270 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 VN1R17PQ8TDU5 208 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 ADIPOR1Q96A54 375 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 C18orf25Q96B23 403 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 DHTKD1Q96HY7 919 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 PPP1R16AQ96I34 528 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 HPDLQ96IR7 371 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 VSTM2LQ96N03 204 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 WRAP53Q9BUR4 548 aaKnown RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 LIN28AQ9H9Z2 209 aaKnown RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 TAS2R3Q9NYW6 316 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 ZNF107Q9UII5 783 aaPredicted RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 NTNG1Q9Y2I2 539 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 NAALAD2Q9Y3Q0 740 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 TNS1Q9HBL0 1735 aaKnown RBP3.38□□□□□ -1.87
SMC4-224ENST00000494612 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 NINLQ9Y2I6 1382 aa3.38□□□□□ -1.87
SMC4-224ENST00000494612 HFM1A2PYH4 1435 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 CCDC144AA2RUR9 1427 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms