RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SCDO00767 359 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 PDPK1O15530 556 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 AKAP10O43572 662 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 TUBBP07437 444 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 MYL2P10916 166 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 PRPS2P11908 318 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 ZNF17P17021 662 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 GSTM5P46439 218 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 RNF144AP50876 292 aaPredicted RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 FOXA1P55317 472 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 OCRLQ01968 901 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 TSC22D1Q15714 1073 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 PRSS53Q2L4Q9 553 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 TMEM201Q5SNT2 666 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 STAC2Q6ZMT1 411 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 GGNQ86UU5 652 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 OR2L13Q8N349 312 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 OR2V1Q8NHB1 315 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 ZFP28Q8NHY6 868 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 RAB3IL1Q8TBN0 382 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 RNF138Q8WVD3 245 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 ROBO4Q8WZ75 1007 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 CIDECQ96AQ7 238 aaPredicted RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 S100PBPQ96BU1 408 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 ELP4Q96EB1 424 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 TRMT61AQ96FX7 289 aaKnown RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 MARK4Q96L34 752 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 C16orf45Q96MC5 204 aaPredicted RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 IQCGQ9H095 443 aaKnown RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 ALG2Q9H553 416 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 MYNNQ9NPC7 610 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 RRAGDQ9NQL2 400 aaPredicted RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 PAQR5Q9NXK6 330 aaPredicted RBP8.62□□□□□ -1.03
UBR4-216ENST00000494503 SH3BP4Q9P0V3 963 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 TBK1Q9UHD2 729 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 ADAM21Q9UKJ8 722 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 RNF115Q9Y4L5 304 aa8.62□□□□□ -1.03
UBR4-216ENST00000494503 DNHD1Q96M86 4753 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 CADP27708 2225 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 A0A087WZY1 265 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 A0A1W2PP18 115 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 A0A1W2PRB8 838 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 RNF212BA8MTL3 300 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 KLF4O43474 513 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 SS18L1O75177 396 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 SEC22BO75396 215 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 NTN1O95631 604 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 OXSR1O95747 527 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 IGKV1D-16P01601 117 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 CD3EP07766 207 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 PYGBP11216 843 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 EFNA1P20827 205 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 LOXP28300 417 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 CDKN1AP38936 164 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 PCYT1AP49585 367 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 PRKAA2P54646 552 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 MANFP55145 182 aaKnown RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 PRR5P85299 388 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 SLC18A2Q05940 514 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 SLC29A2Q14542 456 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 STK11Q15831 433 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 GLYR1Q49A26 553 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 GTF2IRD2BQ6EKJ0 949 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 FAM71E1Q6IPT2 247 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 NOXRED1Q6NXP6 359 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 GALNT18Q6P9A2 607 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 APOOLQ6UXV4 268 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 SH2D5Q6ZV89 423 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ESPNLQ6ZVH7 1005 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ZNF572Q7Z3I7 529 aaPredicted RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 GTF2IRD2Q86UP8 949 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 LILRA2Q8N149 483 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 TMCO5AQ8N6Q1 288 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ZNF611Q8N823 705 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ZNF614Q8N883 585 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 COX18Q8N8Q8 333 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 NUP43Q8NFH3 380 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 STEAP2Q8NFT2 490 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 OR2W6PQ8NHA6 318 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 CLHC1Q8NHS4 586 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ABHD3Q8WU67 409 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 FBXW5Q969U6 566 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 ZBTB8AQ96BR9 441 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 PPCDCQ96CD2 204 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 HS6ST2Q96MM7 605 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 LMF2Q9BU23 707 aaKnown RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 ESRP2Q9H6T0 727 aaKnown RBP8.61□□□□□ -1.03
UBR4-216ENST00000494503 NGBQ9NPG2 151 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 TIGARQ9NQ88 270 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 PLSCR4Q9NRQ2 329 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 MED17Q9NVC6 651 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 GPR52Q9Y2T5 361 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
UBR4-216ENST00000494503 CR1P17927 2039 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 STAB1Q9NY15 2570 aa8.61□□□□□ -1.03
UBR4-216ENST00000494503 CRLF1O75462 422 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 ALOX5P09917 674 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 PABPC4LP0CB38 370 aaKnown RBP8.6□□□□□ -1.03
UBR4-216ENST00000494503 ATP6V1C1P21283 382 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms