RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 FAM71CQ8NEG0 241 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 OR2A12Q8NGT7 310 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 C7orf33Q8WU49 177 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 IL1F10Q8WWZ1 152 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 NOL4LQ96MY1 436 aaPredicted RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 RUFY1Q96T51 708 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 TXN2Q99757 166 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 COMMD4Q9H0A8 199 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 OR51J1Q9H342 316 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 KAT8Q9H7Z6 458 aaKnown RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 COG4Q9H9E3 785 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 GDAP2Q9NXN4 497 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CNOT2Q9NZN8 540 aaKnown RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 P2RX2Q9UBL9 471 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 DCDC2Q9UHG0 476 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 SMC3Q9UQE7 1217 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 RSPH10B2B2RC85 870 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 PDXKO00764 312 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 GPX5O75715 221 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 HPNP05981 417 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 RSPH10BP0C881 870 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 ZCCHC18P0CG32 403 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 PSG2P11465 335 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 ZNF32P17041 273 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 ADORA2BP29275 332 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 NMT1P30419 496 aaKnown RBP2.69□□□□□ -1.98
ITGB1-216ENST00000493758 STARD6P59095 220 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 DAZ2Q13117 558 aaKnown RBP2.69□□□□□ -1.98
ITGB1-216ENST00000493758 MPPED2Q15777 294 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 OR56B1Q8NGI3 324 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 SRSF12Q8WXF0 261 aaKnown RBP2.69□□□□□ -1.98
ITGB1-216ENST00000493758 C14orf79Q96F83 325 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 NSMCE2Q96MF7 247 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 SLC25A51Q9H1U9 297 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 TMEM231Q9H6L2 316 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 PTGES2Q9H7Z7 377 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 DAZ3Q9NR90 486 aaKnown RBP2.69□□□□□ -1.98
ITGB1-216ENST00000493758 RNF6Q9Y252 685 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 CCDC7Q96M83 1385 aa2.69□□□□□ -1.98
ITGB1-216ENST00000493758 UBE4BO95155 1302 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 LRRC30A6NM36 301 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 WASHC1A8K0Z3 465 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 EFNA2O43921 213 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 SSX5O60225 188 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 SLC4A1P02730 911 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 DPP4P27487 766 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 PRDX6P30041 224 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 BTDP43251 543 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 CCDC40Q4G0X9 1142 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 ASPHD2Q6ICH7 369 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 SLC39A4Q6P5W5 647 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 ZNF589Q86UQ0 364 aaPredicted RBP2.68□□□□□ -1.98
ITGB1-216ENST00000493758 OR9A1PQ8NGU1 263 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 ANKRD49Q8WVL7 239 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
ITGB1-216ENST00000493758 UPRTQ96BW1 309 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 ELMO2Q96JJ3 720 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 MCHR1Q99705 422 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 TMEM121Q9BTD3 319 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 SLC25A39Q9BZJ4 359 aaPredicted RBP2.68□□□□□ -1.98
ITGB1-216ENST00000493758 PPDPFQ9H3Y8 114 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 CAB39LQ9H9S4 337 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 APMAPQ9HDC9 416 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 ANO10Q9NW15 660 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 LCMT1Q9UIC8 334 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 RIMS3Q9UJD0 308 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 PLA2G4CQ9UP65 541 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 WDR45Q9Y484 360 aa2.68□□□□□ -1.98
ITGB1-216ENST00000493758 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 SMIM28A0A1B0GU29 152 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 C19orf81C9J6K1 198 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 BBOX1O75936 387 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 IGKV3-11P04433 115 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 ALPPP05187 535 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 ALPPL2P10696 532 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 THRBP10828 461 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 CAV2P51636 162 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 LIM2P55344 173 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 CFAP221Q4G0U5 840 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 WDR88Q6ZMY6 472 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 ZSCAN4Q8NAM6 433 aaPredicted RBP2.67□□□□□ -1.98
ITGB1-216ENST00000493758 OR5AU1Q8NGC0 362 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 FBXO30Q8TB52 745 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 TMEM101Q96IK0 257 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 CITED1Q99966 193 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 NFKBIZQ9BYH8 718 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 XPO4Q9C0E2 1151 aaKnown RBP2.67□□□□□ -1.98
ITGB1-216ENST00000493758 GLIPR2Q9H4G4 154 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 ZDHHC11Q9H8X9 412 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 NANOGQ9H9S0 305 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 LPAR2Q9HBW0 351 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 NAP1L2Q9ULW6 460 aaPredicted RBP2.67□□□□□ -1.98
ITGB1-216ENST00000493758 CDH10Q9Y6N8 788 aa2.67□□□□□ -1.98
ITGB1-216ENST00000493758 PARD3Q8TEW0 1356 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 LGALS8O00214 317 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 UQCRBP14927 111 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 XRCC1P18887 633 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 NTSP30990 170 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 GNPDA1P46926 289 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms