RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 BTNL2Q9UIR0 455 aa6.34□□□□□ -1.39
TOP3A-207ENST00000493648 RPH3AQ9Y2J0 694 aaPredicted RBP6.34□□□□□ -1.39
TOP3A-207ENST00000493648 FAM215AQ9Y5M1 114 aa6.34□□□□□ -1.39
TOP3A-207ENST00000493648 ARHGAP21Q5T5U3 1957 aa6.34□□□□□ -1.39
TOP3A-207ENST00000493648 FLNBO75369 2602 aaKnown RBP6.34□□□□□ -1.39
TOP3A-207ENST00000493648 ASH1LQ9NR48 2969 aaKnown RBP6.34□□□□□ -1.39
TOP3A-207ENST00000493648 PCNX3Q9H6A9 2034 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 USP9YO00507 2555 aaPredicted RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 IGLV3-32A0A0A0MS00 114 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 A0A0G2JNJ9 132 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 A0A1W2PQD3 144 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 CD8B2A6NJW9 211 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 H0Y3Z8 333 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 GTPBP1O00178 669 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF195O14628 629 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 POLR3GO15318 223 aaPredicted RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 HNRNPRO43390 633 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SCN2BO60939 215 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 IL2RAP01589 272 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 PGRP06401 933 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 PEPDP12955 493 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 COX6B1P14854 86 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 TCEA1P23193 301 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 IL12AP29459 219 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 TIMP3P35625 211 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 CHI3L1P36222 383 aaPredicted RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 STARP49675 285 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ANXA11P50995 505 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF41P51814 821 aaPredicted RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 DGKQP52824 942 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ATP12AP54707 1039 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 GFRA1P56159 465 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 EEFSECP57772 596 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 STX1BP61266 288 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 PHC1P78364 1004 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SRYQ05066 204 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 BCL2A1Q16548 175 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ARHGAP11BQ3KRB8 267 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ACSF3Q4G176 576 aaPredicted RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 FLYWCH1Q4VC44 716 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 RAET1LQ5VY80 246 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 NSUN5P2Q63ZY6 315 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF787Q6DD87 383 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 APOOLQ6UXV4 268 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF621Q6ZSS3 439 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 C16orf62Q7Z3J2 963 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 MTERF4Q7Z6M4 381 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 LACC1Q8IV20 430 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 CLEC4FQ8N1N0 589 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 MIER2Q8N344 545 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 MIPOL1Q8TD10 442 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 CKAP2Q8WWK9 683 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SLC35G5Q96KT7 338 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 TEX37Q96LM6 180 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 MAGEB18Q96M61 343 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 CCDC115Q96NT0 180 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 OR52B2Q96RD2 323 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SDF2Q99470 211 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SLC35A5Q9BS91 424 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 RTN4RQ9BZR6 473 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 OR51I1Q9H343 314 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 RMND5AQ9H871 391 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 TCF7L2Q9NQB0 619 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 ZIM2Q9NZV7 527 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 Q9UFV3 132 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 DTNAQ9Y4J8 743 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 KCNE3Q9Y6H6 103 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 SPTBN1Q01082 2364 aaKnown RBP6.33□□□□□ -1.4
TOP3A-207ENST00000493648 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
TOP3A-207ENST00000493648 HECTD1Q9ULT8 2610 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 PTPN13Q12923 2485 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 A0A087WZY1 265 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 CCDC154A6NI56 674 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 RFXANKO14593 260 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 HCRTR2O43614 444 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 GMFGO60234 142 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 STX11O75558 287 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 SASH3O75995 380 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 ANP32DO95626 131 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 KRT75O95678 551 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 OR12D1P0DN82 309 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 POU3F2P20265 443 aaPredicted RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 CEACAM8P31997 349 aaPredicted RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 ADH7P40394 386 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 KHKP50053 298 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 IDH3AP50213 366 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 LHX2P50458 406 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 POLR2JP52435 117 aaKnown RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 AQP5P55064 265 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 CASP9P55211 416 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 RPS26P62854 115 aaKnown RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 EEF1A1P68104 462 aaKnown RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 IRX1P78414 480 aaPredicted RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 TXNL4AP83876 142 aaKnown RBP6.32□□□□□ -1.4
TOP3A-207ENST00000493648 CDSNQ15517 529 aa6.32□□□□□ -1.4
TOP3A-207ENST00000493648 GPR68Q15743 365 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms