RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CACYBPQ9HB71 228 aaKnown RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 GALNT9Q9HCQ5 603 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 POLE3Q9NRF9 147 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 UBQLN4Q9NRR5 601 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 CD300AQ9UGN4 299 aa15.76■□□□□ 0.11
LIME1-208ENST00000493265 CHCHD2Q9Y6H1 151 aaPredicted RBP15.76■□□□□ 0.11
LIME1-208ENST00000493265 EXPH5Q8NEV8 1989 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 CXCR6O00574 342 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 SCDO00767 359 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 OPN1SWP03999 348 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 CD46P15529 392 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 EVI2BP34910 448 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 CLK3P49761 638 aaKnown RBP15.75■□□□□ 0.11
LIME1-208ENST00000493265 TNFSF10P50591 281 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 ATP12AP54707 1039 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 MAPK14Q16539 360 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 HPS6Q86YV9 775 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 SLC30A8Q8IWU4 369 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 METTL25Q8N6Q8 603 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 ZNF527Q8NB42 609 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 MDS2Q8NDY4 140 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 TNIP2Q8NFZ5 429 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 GRHL3Q8TE85 626 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 PAQR8Q8TEZ7 354 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 HOXD1Q9GZZ0 328 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 PCDHAC1Q9H158 963 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 TRIM45Q9H8W5 580 aaPredicted RBP15.75■□□□□ 0.11
LIME1-208ENST00000493265 SACM1LQ9NTJ5 587 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 KCNE5Q9UJ90 142 aa15.75■□□□□ 0.11
LIME1-208ENST00000493265 CNOT11Q9UKZ1 510 aaKnown RBP15.75■□□□□ 0.11
LIME1-208ENST00000493265 A0A0G2JMM0 328 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 A0A1W2PPB8 328 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 A0A1W2PRS3 328 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 C17orf51A8MQB3 221 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 KIR3DP1A8MWS1 328 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 GMFGO60234 142 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 FADS1O60427 444 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 GMNNO75496 209 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 UGT2B17O75795 530 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 SP1P08047 785 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 HSD17B1P14061 328 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 IL7RP16871 459 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 TBXA2RP21731 343 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 ME2P23368 584 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 CASP3P42574 277 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 DNASE1L1P49184 302 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 KCNJ2P63252 427 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 LRRC23Q53EV4 343 aaPredicted RBP15.74■□□□□ 0.11
LIME1-208ENST00000493265 ZNF766Q5HY98 468 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 INTS11Q5TA45 600 aaKnown RBP15.74■□□□□ 0.11
LIME1-208ENST00000493265 SLC25A25Q6KCM7 469 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 APOOLQ6UXV4 268 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 VRK2Q86Y07 508 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 PEX5LQ8IYB4 626 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 FBXW8Q8N3Y1 598 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 GOLM1Q8NBJ4 401 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 POGLUT1Q8NBL1 392 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 OR52P1PQ8NH57 321 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 SLC26A7Q8TE54 656 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 FAM162AQ96A26 154 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 JSRP1Q96MG2 331 aaPredicted RBP15.74■□□□□ 0.11
LIME1-208ENST00000493265 ZNF607Q96SK3 696 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 OSBPL11Q9BXB4 747 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 SAP130Q9H0E3 1048 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 BCL2L10Q9HD36 194 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 CNIH4Q9P003 139 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 LUZP4Q9P127 313 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 PCDHGB7Q9Y5F8 929 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
LIME1-208ENST00000493265 CLDN24A6NM45 220 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 NPIPB9F8W1W9 429 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 M0QX08 132 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 DPM1O60762 260 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 GCM2O75603 506 aaPredicted RBP15.73■□□□□ 0.11
LIME1-208ENST00000493265 CYP7B1O75881 506 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 HTR1EP28566 365 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 LCN1P31025 176 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 VEZF1Q14119 521 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 IGFBP7Q16270 282 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 ZNF311Q5JNZ3 666 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 PRAMEF8Q5VWM4 474 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 PRAMEF7Q5VXH5 474 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 GLYATQ6IB77 296 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 OR5M10Q6IEU7 315 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 IGFL3Q6UXB1 125 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 GALNTL5Q7Z4T8 443 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 ARMC8Q8IUR7 673 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 ULK2Q8IYT8 1036 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 ARHGAP24Q8N264 748 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 SMYD1Q8NB12 490 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 PHOSPHO1Q8TCT1 267 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 WDR60Q8WVS4 1066 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 DOHHQ9BU89 302 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 RTN4RQ9BZR6 473 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 SH2D2AQ9NP31 389 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 SEC14L3Q9UDX4 400 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 DTNAQ9Y4J8 743 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 NBASA2RRP1 2371 aa15.73■□□□□ 0.11
LIME1-208ENST00000493265 LRRK2Q5S007 2527 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms