RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZNF337Q9Y3M9 751 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 CCL27Q9Y4X3 112 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 VPS13CQ709C8 3753 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ACANP16112 2415 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 SMIM23A6NLE4 172 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 GJE1A6NN92 205 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 H3BNH8 94 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 LSM1O15116 133 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 SEC14L5O43304 696 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 SNUPNO95149 360 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 SYNGR4O95473 234 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 PLGP00747 810 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 SDC1P18827 310 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 IL11P20809 199 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ATP6V1C1P21283 382 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 CRYGSP22914 178 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ELK4P28324 431 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 KIR2DL2P43627 348 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 PRKAG1P54619 331 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 SUMO3P55854 103 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 CTBP2P56545 445 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 CLDN15P56746 228 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 RAC1P63000 192 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 FOXD4Q12950 439 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 TP53BP2Q13625 1128 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 PCLAFQ15004 111 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 PON3Q15166 354 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 TMEM44Q2T9K0 475 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 GRAMD1BQ3KR37 738 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 LSM12Q3MHD2 195 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 ATP6AP1LQ52LC2 224 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 CPTPQ5TA50 214 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 KANK2Q63ZY3 851 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 CLEC6AQ6EIG7 209 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 Q6ZSR9 355 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ESPNLQ6ZVH7 1005 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ZNF551Q7Z340 670 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 SZRD1Q7Z422 152 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 BIVMQ86UB2 503 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 MARCH3Q86UD3 253 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 C10orf107Q8IVU9 208 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 DDIASQ8IXT1 998 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 GTPBP8Q8N3Z3 284 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 COX18Q8N8Q8 333 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 OR56A1Q8NGH5 318 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 FAM110BQ8TC76 370 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 TWIST2Q8WVJ9 160 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 SLC9A6Q92581 669 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 REXO5Q96IC2 774 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 GMPPAQ96IJ6 420 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 EGLN2Q96KS0 407 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ZIM3Q96PE6 472 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 USB1Q9BQ65 265 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 TACO1Q9BSH4 297 aaKnown RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 GATA5Q9BWX5 397 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 BTBD2Q9BX70 525 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 LIME1Q9H400 295 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 EQTNQ9NQ60 294 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 ATP6V1HQ9UI12 483 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 DNAJC15Q9Y5T4 150 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 SNX8Q9Y5X2 465 aa7.88□□□□□ -1.15
NUP50-217ENST00000491860 HRNRQ86YZ3 2850 aaPredicted RBP7.88□□□□□ -1.15
NUP50-217ENST00000491860 NSD1Q96L73 2696 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 FLNAP21333 2647 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 PCNX3Q9H6A9 2034 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 A0A1W2PRB8 838 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 EIF1AYO14602 144 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 SCAMP2O15127 329 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 ADAMDEC1O15204 470 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 SS18L1O75177 396 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 KCNK2O95069 426 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 OXSR1O95747 527 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 SHBGP04278 402 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 NUDT17P0C025 328 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 LINC00032P0C843 101 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 TCEA1P23193 301 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 ADH6P28332 368 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 UGT2B10P36537 528 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 EIF1AXP47813 144 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 SUCLG1P53597 346 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 NR1H2P55055 460 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 ADAM8P78325 824 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 POU6F2P78424 691 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 IFFO1Q0D2I5 559 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 RNPS1Q15287 305 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 GUSBP1Q15486 140 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 RFTN2Q52LD8 501 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 MFSD12Q6NUT3 480 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 VWA1Q6PCB0 445 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 PRSS57Q6UWY2 283 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 BEND4Q6ZU67 534 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 SSX8Q7RTT4 187 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 BTLAQ7Z6A9 289 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 TRABD2AQ86V40 505 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 P3H2Q8IVL5 708 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 GSPT2Q8IYD1 628 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 C4orf33Q8N1A6 199 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 B4GALNT2Q8NHY0 566 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 FNDC9Q8TBE3 224 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms