RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 FRG2CA6NGY1 282 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 EVPLLA8MZ36 301 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SCN2BO60939 215 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 TRIM3O75382 744 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 REM1O75628 298 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ATP5HO75947 161 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ZCCHC18P0CG32 403 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 EFNA1P20827 205 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 GDF1P27539 372 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 IL12AP29459 219 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SOX18P35713 384 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CDK9P50750 372 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 MNAT1P51948 309 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ZNF155Q12901 538 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 MYBPHQ13203 477 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CYLC2Q14093 348 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 NNATQ16517 81 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 DECR1Q16698 335 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 DCST1Q5T197 706 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ATAD3BQ5T9A4 648 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CGB2Q6NT52 195 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 WDR53Q7Z5U6 358 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC44A2Q8IWA5 706 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ULK2Q8IYT8 1036 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CLECL1Q8IZS7 167 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SIMC1Q8NDZ2 872 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 GOT1L1Q8NHS2 421 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 RP9Q8TA86 221 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 GPR151Q8TDV0 419 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 JADE3Q92613 823 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CMTM5Q96DZ9 223 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 FAM120BQ96EK7 910 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ZNF597Q96LX8 424 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 MS4A4EQ96PG1 132 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SECISBP2Q96T21 854 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SH3GL1Q99961 368 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 DOHHQ9BU89 302 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 G6PC3Q9BUM1 346 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 PIGUQ9H490 435 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 FOLH1BQ9HBA9 442 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SAR1AQ9NR31 198 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SDHAF3Q9NRP4 125 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 GID8Q9NWU2 228 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 THUMPD1Q9NXG2 353 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 CAPN7Q9Y6W3 813 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 SPG11Q96JI7 2443 aa10.05□□□□□ -0.8
TMEM39A-211ENST00000491685 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 BBIP1A8MTZ0 92 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 NR5A2O00482 541 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 EBAG9O00559 213 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 TO15178 435 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 KRT34O76011 436 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 NPPAP01160 153 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 HMGN2P05204 90 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 IL12BP29460 328 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 PRDX6P30041 224 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 LCN1P31025 176 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 PNLIPRP2P54317 469 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 PHC1P78364 1004 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 CRYZQ08257 329 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 PLCXD2Q0VAA5 305 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 KLF10Q13118 480 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 EFR3AQ14156 821 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 RCAN2Q14206 197 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 CDC73Q6P1J9 531 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 ANGPTL8Q6UXH0 198 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 MTDHQ86UE4 582 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 ZZZ3Q8IYH5 903 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 TNIP2Q8NFZ5 429 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 OR9I1Q8NGQ6 314 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 SPPL2AQ8TCT8 520 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 NUDT8Q8WV74 236 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 DIO2Q92813 273 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 VPS33AQ96AX1 596 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 BTBD9Q96Q07 612 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 STACQ99469 402 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC35A5Q9BS91 424 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 LMF2Q9BU23 707 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 ITPAQ9BY32 194 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 HOXD1Q9GZZ0 328 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 NXF5Q9H1B4 397 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 UBQLN3Q9H347 655 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 LIME1Q9H400 295 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 CXorf36Q9H7Y0 433 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 ACKR4Q9NPB9 350 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 EQTNQ9NQ60 294 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 CORO2BQ9UQ03 480 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC6A5Q9Y345 797 aa10.04□□□□□ -0.8
TMEM39A-211ENST00000491685 A0A096LPI6 279 aa10.03□□□□□ -0.8
TMEM39A-211ENST00000491685 C15orf38-AP3S2A0A0A6YYH1 394 aa10.03□□□□□ -0.8
TMEM39A-211ENST00000491685 RNF103-CHMP3A0A140T963 221 aa10.03□□□□□ -0.8
TMEM39A-211ENST00000491685 ANKRD33BA6NCL7 494 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms