RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 C3P1Q6ZMU1 363 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR5M9Q8NGP3 310 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NMUR2Q9GZQ4 415 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF350Q9GZX5 532 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TP63Q9H3D4 680 aaPredicted RBP14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PTGES2Q9H7Z7 377 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TPT1P8Q9HAU6 139 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 POLE3Q9NRF9 147 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PNPLA3Q9NST1 481 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TAS2R10Q9NYW0 307 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 KLHL14Q9P2G3 628 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MEMO1Q9Y316 297 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MRPS18CQ9Y3D5 142 aaKnown RBP14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 POLEQ07864 2286 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 WIPF3A6NGB9 483 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FIGNL2A6NMB9 653 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 E9PLN8 166 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NPIPB9F8W1W9 429 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GUSBP08236 651 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HOXB9P17482 250 aaPredicted RBP14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HPCAP84074 193 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CRYZQ08257 329 aaKnown RBP14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GPR68Q15743 365 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CD226Q15762 336 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 KLHL26Q53HC5 615 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 EMC4Q5J8M3 183 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 LRIF1Q5T3J3 769 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF585AQ6P3V2 769 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OLIG3Q7RTU3 272 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MTERF4Q7Z6M4 381 aaKnown RBP14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 IFNEQ86WN2 208 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF614Q8N883 585 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ROPN1LQ96C74 230 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C1GALT1C1Q96EU7 318 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 AURKBQ96GD4 344 aaPredicted RBP14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CCDC120Q96HB5 630 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 VKORC1Q9BQB6 163 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MRGBPQ9NV56 204 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 WDR45Q9Y484 360 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PCDHB14Q9Y5E9 798 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MYO18BQ8IUG5 2567 aa14.79□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 A0A1W2PP18 115 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 H3BNH8 94 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GMFGO60234 142 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 KIAA0513O60268 411 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZIC3O60481 467 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FCMRO60667 390 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZG16O60844 167 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ACTL6AO96019 429 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CD1EP15812 388 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 BMP7P18075 431 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HK1P19367 917 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MSX1P28360 303 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MVDP53602 400 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GPAT3Q53EU6 434 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PAGE3Q5JUK9 113 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 VASNQ6EMK4 673 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PHOSPHO1Q8TCT1 267 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PHF10Q8WUB8 498 aaKnown RBP14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C10orf82Q8WW14 230 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ABTB1Q969K4 478 aaPredicted RBP14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DMRTA2Q96SC8 542 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TIMP4Q99727 224 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 UGT2B28Q9BY64 529 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RAD21L1Q9H4I0 556 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 LEF1Q9UJU2 399 aaPredicted RBP14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MKLN1Q9UL63 735 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 LIPT1Q9Y234 373 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RPH3AQ9Y2J0 694 aaPredicted RBP14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DTNAQ9Y4J8 743 aa14.78□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PRAMEF27A3QJZ7 478 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CLIC1O00299 241 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 WDR1O75083 606 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TNFRSF21O75509 655 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 H6PDO95479 791 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ETFAP13804 333 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GABRA1P14867 456 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TCEA1P23193 301 aaKnown RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ACVR2AP27037 513 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CRATP43155 626 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RNF144AP50876 292 aaPredicted RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GFRA1P56159 465 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF141Q15928 474 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SYPL1Q16563 259 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF630Q2M218 657 aaPredicted RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DCST1Q5T197 706 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PDZK1Q5T2W1 519 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TYW3Q6IPR3 259 aaKnown RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 AAGABQ6PD74 315 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FRRS1Q6ZNA5 592 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NCCRP1Q6ZVX7 275 aaPredicted RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PM20D2Q8IYS1 436 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF619Q8N2I2 560 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ANKFN1Q8N957 763 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 B4GALNT2Q8NHY0 566 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TSPEARQ8WU66 669 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SH3YL1Q96HL8 342 aaPredicted RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SFXN2Q96NB2 322 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms