RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 LIPCP11150 499 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 NDUFV2P19404 249 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CCND3P30281 292 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HTR4Q13639 388 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 MPEG1Q2M385 716 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CCNJQ5T5M9 372 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HBMQ6B0K9 141 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM25Q86YD3 366 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 PCSK9Q8NBP7 692 aaKnown RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 DUSP18Q8NEJ0 188 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CXorf58Q96LI9 332 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 DPH7Q9BTV6 452 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 SEMA4CQ9C0C4 833 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 MYNNQ9NPC7 610 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HINT3Q9NQE9 182 aaKnown RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 SLC39A1Q9NY26 324 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 USP36Q9P275 1121 aaKnown RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 A0A1B0GVI7 797 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 GLTPD2A6NH11 291 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 QSOX1O00391 747 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HMGN4O00479 90 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CA12O43570 354 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 UGDHO60701 494 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 HPXP02790 462 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 FBXO45P0C2W1 286 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 OMPP47874 163 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 SELENOPP49908 381 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 TPMTP51580 245 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 E2F1Q01094 437 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 KCNC3Q14003 757 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 C12orf73Q69YU5 71 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 METAP1DQ6UB28 335 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CBARPQ8N350 705 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 RAB42Q8N4Z0 105 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 ZDHHC1Q8WTX9 485 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 ZG16BQ96DA0 208 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 CD180Q99467 661 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 KLF16Q9BXK1 252 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM185BQ9H7F4 350 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 RPS6KB2Q9UBS0 482 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 SLC7A7Q9UM01 511 aa9.21□□□□□ -0.94
ERCC3-208ENST00000491292 RLFQ13129 1914 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 PDCD11Q14690 1871 aaKnown RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF236Q9UL36 1845 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 SPAG17Q6Q759 2223 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM129A0AVI4 362 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 POU3F2P20265 443 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 MAPK9P45984 424 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 CCR4P51679 360 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TUSC1Q2TAM9 212 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 OR5M10Q6IEU7 315 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 KIAA0907Q7Z7F0 614 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 PDZD9Q8IXQ8 264 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 FANK1Q8TC84 345 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM255BQ8WV15 326 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 RGMAQ96B86 450 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 IFT46Q9NQC8 304 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF780BQ9Y6R6 833 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TRBV5-4A0A0C4DH59 114 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ACOD1A6NK06 481 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 PRICKLE3O43900 615 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 CREBL2O60519 120 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 SOX30O94993 753 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 MMP12P39900 470 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 RAD52P43351 418 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 GDI2P50395 445 aaKnown RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ERVK-21P61565 698 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 FKBP1BP68106 108 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 GNA13Q14344 377 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 SLC9A5Q14940 896 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 PRSS53Q2L4Q9 553 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 KHDRBS2Q5VWX1 349 aaKnown RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF322Q6U7Q0 402 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 USP50Q70EL3 339 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-208ENST00000491292 SLC9B2Q86UD5 537 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 OR8D4Q8NGM9 314 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 GHSRQ92847 366 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 NOX3Q9HBY0 568 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 SEMA4GQ9NTN9 838 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TRAV27A0A087WT01 109 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TRBV2A0A0J9YWF9 115 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 GOSR2O14653 212 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF30P17039 623 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 NPR2P20594 1047 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 CLCNKAP51800 687 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 PRR5P85299 388 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 FAM74A1Q5RGS3 127 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM69Q5SWH9 247 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZDHHC20Q5W0Z9 365 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 NLRC3Q7RTR2 1065 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 UBE2Q1Q7Z7E8 422 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 OR4K13Q8NH42 304 aa9.2□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF461Q8TAF7 563 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms