RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CETN1Q12798 172 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 LTB4RQ15722 352 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 CCDC40Q4G0X9 1142 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 MS4A13Q5J8X5 152 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 SYPL2Q5VXT5 272 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 ZNF776Q68DI1 518 aaPredicted RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 CYB5D1Q6P9G0 228 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 ZCCHC12Q6PEW1 402 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 TAC4Q86UU9 113 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 DNAAF5Q86Y56 855 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 LRRC49Q8IUZ0 686 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 NAXDQ8IW45 347 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 MFN1Q8IWA4 741 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 OR4C15Q8NGM1 316 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 NELFBQ8WX92 580 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 ZNF606Q8WXB4 792 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 TSACCQ96A04 125 aaPredicted RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 MOB3AQ96BX8 217 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 BIRC7Q96CA5 298 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 ZNF830Q96NB3 372 aaPredicted RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 ABHD1Q96SE0 405 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 PRMT1Q99873 361 aaKnown RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 MAPKAP1Q9BPZ7 522 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 DDX50Q9BQ39 737 aaKnown RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 KLHL4Q9C0H6 718 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 RSPH9Q9H1X1 276 aaPredicted RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 NEUROG2Q9H2A3 272 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 SGK2Q9HBY8 427 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 TM9SF3Q9HD45 589 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 UBE2TQ9NPD8 197 aaPredicted RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 ACP6Q9NPH0 428 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 XPO7Q9UIA9 1087 aaKnown RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 HOOK1Q9UJC3 728 aaKnown RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 PPIEQ9UNP9 301 aaKnown RBP2.6□□□□□ -1.99
PHC3-213ENST00000491258 ERVW-1Q9UQF0 538 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 OR51B4Q9Y5P0 310 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 RPS6KL1Q9Y6S9 549 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 MYO9BQ13459 2157 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 MYH7P12883 1935 aa2.6□□□□□ -1.99
PHC3-213ENST00000491258 SETD2Q9BYW2 2564 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 SIP14410 1827 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 A0A1B0GTQ1 180 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 EDDM13A0A1B0GTR0 161 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 BICDL2A1A5D9 508 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 TLR4O00206 839 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 FLRT2O43155 660 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 TNFSF12O43508 249 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 MED7O43513 233 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 LATO43561 262 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 DFNA5O60443 496 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SAP30O75446 220 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 LETM1O95202 739 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 LUC7L3O95232 432 aaKnown RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 MOCS2O96007 188 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 DNTTP04053 509 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 LINGO3P0C6S8 592 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SLC2A3P11169 496 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 PDGFRAP16234 1089 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 GOT1P17174 413 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 GPX3P22352 226 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CCR1P32246 355 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 PLK1P53350 603 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 METAP1P53582 386 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 C21orf59P57076 290 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 ST8SIA6P61647 398 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SULT2A1Q06520 285 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 RASGEF1BQ0VAM2 473 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 BECN1Q14457 450 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CST6Q15828 149 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 KLHL10Q6JEL2 608 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 ENOSF1Q7L5Y1 443 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CACUL1Q86Y37 369 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 MMAAQ8IVH4 418 aaKnown RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 ZNF683Q8IZ20 524 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 APCDD1Q8J025 514 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 STK40Q8N2I9 435 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CARNMT1Q8N4J0 409 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 ZNF557Q8N988 423 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 ZNF397Q8NF99 534 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 OR2T34Q8NGX1 318 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SAP25Q8TEE9 199 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 GANCQ8TET4 914 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SETD7Q8WTS6 366 aaKnown RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 TEKT4Q8WW24 435 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SHC3Q92529 594 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 NT5C3BQ969T7 300 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 NABP1Q96AH0 204 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 FAM131CQ96AQ9 280 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 BTN2A3PQ96KV6 586 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CFAP57Q96MR6 1250 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SERPINB11Q96P15 392 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CPXM1Q96SM3 734 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 FEM1AQ9BSK4 669 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CRACR2AQ9BSW2 395 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 TRIM62Q9BVG3 475 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 THAP9Q9H5L6 903 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 POPDC2Q9HBU9 364 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 ZNF275Q9NSD4 429 aaPredicted RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 OLAHQ9NV23 265 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 FBXL12Q9NXK8 326 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms