RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TXNDC15	Q96J42	360 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	ART5	Q96L15	291 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	BMF	Q96LC9	184 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	C10orf90	Q96M02	699 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	NDC1	Q9BTX1	674 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	CDADC1	Q9BWV3	514 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	SORBS1	Q9BX66	1292 aa	Known RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	PBX4	Q9BYU1	374 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	PLA2G2F	Q9BZM2	168 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	SLC22A4	Q9H015	551 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	KLHL31	Q9H511	634 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	XKR8	Q9H6D3	395 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	C12orf10	Q9HB07	376 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	ZBTB20	Q9HC78	741 aa	Predicted RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	FGF22	Q9HCT0	170 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833		Q9N2J8	555 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	AMBN	Q9NP70	447 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	EXOSC4	Q9NPD3	245 aa	Known RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	C11orf16	Q9NQ32	467 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	TRIM36	Q9NQ86	728 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	USP36	Q9P275	1121 aa	Known RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	ZNF624	Q9P2J8	865 aa	Predicted RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	TNFRSF10D	Q9UBN6	386 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	RPS6KB2	Q9UBS0	482 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	APOBEC3B	Q9UH17	382 aa	Known RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	LSM2	Q9Y333	95 aa	Known RBP	5.91	□□□□□ -1.46
FN1-223	ENST00000490833	CMAHP	Q9Y471	501 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	NOX1	Q9Y5S8	564 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	SNX11	Q9Y5W9	270 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	PIAS3	Q9Y6X2	628 aa		5.91	□□□□□ -1.46
FN1-223	ENST00000490833	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PTPRS	Q13332	1948 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CDHR4	A6H8M9	788 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	OR5K3	A6NET4	321 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PRR23A	A6NEV1	266 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	FABP12	A6NFH5	140 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	LILRA5	A6NI73	299 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CCDC85C	A6NKD9	419 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	HSPB2	A8KAH6	182 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PRR23D1	E9PI22	279 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833		H0YGG7	62 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	SURF4	O15260	269 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	RGS5	O15539	181 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	SEC14L5	O43304	696 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ZNF749	O43361	778 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CHP2	O43745	196 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	BRINP1	O60477	761 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ARL6IP5	O75915	188 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	NKX2-2	O95096	273 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MT-ND5	P03915	603 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	FUCA1	P04066	466 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	KRT8	P05787	483 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PRR23D2	P0DMB1	279 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ALPPL2	P10696	532 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	UBL4A	P11441	157 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	BMP4	P12644	408 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PEPD	P12955	493 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	APEH	P13798	732 aa	Known RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MYOG	P15173	224 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	POU3F3	P20264	500 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	TNFRSF1B	P20333	461 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	NT5E	P21589	574 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MAT2A	P31153	395 aa	Known RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	IDUA	P35475	653 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ADH7	P40394	386 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	WAS	P42768	502 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CRYBB2	P43320	205 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	FASLG	P48023	281 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MTNR1B	P49286	362 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	INPP1	P49441	399 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	RGS19	P49795	217 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	BLVRA	P53004	296 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	NUDT6	P53370	316 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CASP9	P55211	416 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ARF3	P61204	181 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	RPS26	P62854	115 aa	Known RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	UBE2I	P63279	158 aa	Known RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	EEF1A1	P68104	462 aa	Known RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	SHC2	P98077	582 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PITPNA	Q00169	270 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MESP2	Q0VG99	397 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	IL10RA	Q13651	578 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	SHH	Q15465	462 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	MAPK11	Q15759	364 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	HSPB2	Q16082	182 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PRSS53	Q2L4Q9	553 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PGGHG	Q32M88	737 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	AMZ1	Q400G9	498 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CYP27C1	Q4G0S4	372 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	DEFB134	Q4QY38	66 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	CCDC58	Q4VC31	144 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	HSD17B12	Q53GQ0	312 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	ZNF628	Q5EBL2	1059 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	PRRT3	Q5FWE3	981 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.9	□□□□□ -1.46
FN1-223	ENST00000490833	SLC35D3	Q5M8T2	416 aa		5.9	□□□□□ -1.46
FN1-223	ENST00000490833	EXOSC6	Q5RKV6	272 aa	Known RBP	5.9	□□□□□ -1.46

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