RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 HCFC1P51610 2035 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 NAV2Q8IVL1 2488 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 A0A1W2PQD3 144 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 ZIC3O60481 467 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 SLC22A3O75751 556 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 TGDSO95455 350 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 IL6P05231 212 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 PGRP06401 933 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 PEPDP12955 493 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 CPN1P15169 458 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 GRNP28799 593 aaKnown RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 ANXA11P50995 505 aaKnown RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 STX1BP61266 288 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 SRYQ05066 204 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 ACSF3Q4G176 576 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 EXOSC6Q5RKV6 272 aaKnown RBP12.96□□□□□ -0.33
BRCA1-218ENST00000489037 RAET1LQ5VY80 246 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 C16orf62Q7Z3J2 963 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 OR4C3Q8NH37 302 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 PIGQQ9BRB3 760 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 CALHM2Q9HA72 323 aa12.96□□□□□ -0.33
BRCA1-218ENST00000489037 IGLV3-32A0A0A0MS00 114 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 A0A0G2JNJ9 132 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 CD8B2A6NJW9 211 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 GTPBP1O00178 669 aaKnown RBP12.95□□□□□ -0.34
BRCA1-218ENST00000489037 GMFGO60234 142 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 SCN2BO60939 215 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 POU3F2P20265 443 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-218ENST00000489037 TIMP3P35625 211 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF41P51814 821 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-218ENST00000489037 DGKQP52824 942 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 ATP12AP54707 1039 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 GFRA1P56159 465 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
BRCA1-218ENST00000489037 PHC1P78364 1004 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 BCL2A1Q16548 175 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 DCST1Q5T197 706 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 NSUN5P2Q63ZY6 315 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 EPGNQ6UW88 154 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 APOOLQ6UXV4 268 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MTERF4Q7Z6M4 381 aaKnown RBP12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MIER2Q8N344 545 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MEIOBQ8N635 442 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 GATSQ8NAP1 163 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 OR5D16Q8NGK9 328 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 C1GALT1C1Q96EU7 318 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MAGEB18Q96M61 343 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 CCDC115Q96NT0 180 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 OR52B2Q96RD2 323 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 SLC35A5Q9BS91 424 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 RMND5AQ9H871 391 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 FBXO34Q9NWN3 711 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 ZIM2Q9NZV7 527 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 Q9UFV3 132 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 MED12LQ86YW9 2145 aa12.95□□□□□ -0.34
BRCA1-218ENST00000489037 A0A087WZY1 265 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 CCDC154A6NI56 674 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 DVL2O14641 736 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 STX11O75558 287 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 ANP32DO95626 131 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 STARP49675 285 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 KHKP50053 298 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 RPS26P62854 115 aaKnown RBP12.94□□□□□ -0.34
BRCA1-218ENST00000489037 TXNL4AP83876 142 aaKnown RBP12.94□□□□□ -0.34
BRCA1-218ENST00000489037 CDSNQ15517 529 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 SLC25A35Q3KQZ1 300 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF621Q6ZSS3 439 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 MAVSQ7Z434 540 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 ZAR1Q86SH2 424 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 CLEC4FQ8N1N0 589 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF614Q8N883 585 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 B4GALNT2Q8NHY0 566 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 MARK4Q96L34 752 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 TEX37Q96LM6 180 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 SDF2Q99470 211 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 UCK2Q9BZX2 261 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 TCF7L2Q9NQB0 619 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 VDAC3Q9Y277 283 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 KCNE3Q9Y6H6 103 aa12.94□□□□□ -0.34
BRCA1-218ENST00000489037 NKX2-6A6NCS4 301 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 C17orf51A8MQB3 221 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 C9JVG2 144 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 RFXANKO14593 260 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF195O14628 629 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 HCRTR2O43614 444 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 KRT75O95678 551 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms