RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 UROSP10746 265 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 PRPS2P11908 318 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 DNAJB13P59910 316 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 KIAA0040Q15053 153 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 EXOC3L1Q86VI1 746 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 IFT20Q8IY31 132 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 GTPBP8Q8N3Z3 284 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 CDRT4Q8N9R6 151 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 OR10D3Q8NH80 312 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 ADGRG7Q96K78 797 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 MS4A4EQ96PG1 132 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 BDH2Q9BUT1 245 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 TXLNGYQ9BZA5 131 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 HHATLQ9HCP6 504 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 PAQR5Q9NXK6 330 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 MCTS1Q9ULC4 181 aaKnown RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 CLEC4AQ9UMR7 237 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 PTGDR2Q9Y5Y4 395 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-231ENST00000488905 A0A1W2PPM1 405 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 NPIPB8E9PQR5 432 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 NDUFB5O43674 189 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 PLIN3O60664 434 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 SEC22BO75396 215 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 PPP3CBP16298 524 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CTBP2P56545 445 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CTU2Q2VPK5 515 aaKnown RBP16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CCDC153Q494R4 210 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 ZNF385BQ569K4 471 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 BEX5Q5H9J7 111 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 STAC2Q6ZMT1 411 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
HDAC6-231ENST00000488905 GATSQ8NAP1 163 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 ZFP28Q8NHY6 868 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 ZBTB8AQ96BR9 441 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 GIMAP5Q96F15 307 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 ZBED6CLQ96FA7 236 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-231ENST00000488905 NPAS1Q99742 590 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 CCT7Q99832 543 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 GSX2Q9BZM3 304 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 LRTM1Q9HBL6 345 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 PLSCR4Q9NRQ2 329 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 C1orf109Q9NX04 203 aa16.5■□□□□ 0.23
HDAC6-231ENST00000488905 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 C7orf72A4D263 438 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 TRIM64A6NGJ6 449 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 TRIM64BA6NI03 449 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 SMAD7O15105 426 aaKnown RBP16.49■□□□□ 0.23
HDAC6-231ENST00000488905 ACP2P11117 423 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 SDC1P18827 310 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 PTH2RP49190 550 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 ZNF41P51814 821 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-231ENST00000488905 PRKAG1P54619 331 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 SLC18A2Q05940 514 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 PLPPR5Q32ZL2 321 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 SH2D5Q6ZV89 423 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 NUP43Q8NFH3 380 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 OR4C3Q8NH37 302 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 CEP70Q8NHQ1 597 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 NUDT8Q8WV74 236 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 PPCDCQ96CD2 204 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 FCRL1Q96LA6 429 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 RNF145Q96MT1 663 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
HDAC6-231ENST00000488905 REEP4Q9H6H4 257 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 MED17Q9NVC6 651 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 OXSMQ9NWU1 459 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 NTMQ9P121 344 aa16.49■□□□□ 0.23
HDAC6-231ENST00000488905 SLC28A1O00337 649 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 TNFSF11O14788 317 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 KLF4O43474 513 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 RGS14O43566 566 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 CXCL13O43927 109 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 TBX19O60806 448 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 KCNK2O95069 426 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 SYNGR4O95473 234 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 NEFHP12036 1026 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 IL11P20809 199 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 PSMA4P25789 261 aaKnown RBP16.48■□□□□ 0.23
HDAC6-231ENST00000488905 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-231ENST00000488905 NR1H2P55055 460 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 RAC1P63000 192 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 PDE7AQ13946 482 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 MFSD12Q6NUT3 480 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 FIGNL1Q6PIW4 674 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 ZNF704Q6ZNC4 412 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-231ENST00000488905 ESPNLQ6ZVH7 1005 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 PLEKHM3Q6ZWE6 761 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 ZAR1Q86SH2 424 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 CCDC63Q8NA47 563 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 SLC16A11Q8NCK7 471 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 OR2V1Q8NHB1 315 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 ACTRT2Q8TDY3 377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms