RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	POM121C	A8CG34	1229 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	TRIM49D1	C9J1S8	452 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	CXCL13	O43927	109 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	DLX3	O60479	287 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	SUPT7L	O94864	414 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	UTS2	O95399	124 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	PLG	P00747	810 aa	Predicted RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	THBS1	P07996	1170 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	ANXA4	P09525	319 aa	Predicted RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	DANCR	P0C864	163 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNF17	P17021	662 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	PSMB1	P20618	241 aa	Known RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	RFX3	P48380	749 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	SERPINB9	P50453	376 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	CTBP2	P56545	445 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	RPS4X	P62701	263 aa	Known RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	C17orf67	Q0P5P2	114 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	VEZF1	Q14119	521 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNF678	Q5SXM1	525 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	MFSD12	Q6NUT3	480 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	ADAM5	Q6NVV9	412 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	DNM1P46	Q6ZS02	220 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	BEND4	Q6ZU67	534 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	GPRIN3	Q6ZVF9	776 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	GALNT10	Q86SR1	603 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	RELL1	Q8IUW5	271 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	PHC2	Q8IXK0	858 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	KCNA7	Q96RP8	456 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	KLHDC3	Q9BQ90	382 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	PRRG4	Q9BZD6	226 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	TBL1XR1	Q9BZK7	514 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	OR10A4	Q9H209	315 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	TAS2R7	Q9NYW3	318 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571	TIMM22	Q9Y584	194 aa		10.13	□□□□□ -0.79
SNU13-208	ENST00000488571		A0A0J9YW62	118 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	RNF212B	A8MTL3	300 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	ADAMDEC1	O15204	470 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GCM2	O75603	506 aa	Predicted RBP	10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	SLITRK5	O94991	958 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	OPN1LW	P04000	364 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	HMOX2	P30519	316 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	AGTR1	P30556	359 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	ACVR1B	P36896	505 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	MAP3K8	P41279	467 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GSTM5	P46439	218 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	CLK3	P49761	638 aa	Known RBP	10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	BTK	Q06187	659 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNF763	Q0D2J5	394 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	C2orf80	Q0P641	193 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	TEX35	Q5T0J7	233 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	FAM71E1	Q6IPT2	247 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	HMBOX1	Q6NT76	420 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	SEZ6L2	Q6UXD5	910 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	EXOC3L1	Q86VI1	746 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	PIK3R3	Q92569	461 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	SLC9A6	Q92581	669 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	NEUROG1	Q92886	237 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	S100PBP	Q96BU1	408 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	ELP4	Q96EB1	424 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	AMDHD1	Q96NU7	426 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	C12orf49	Q9H741	205 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GRPEL1	Q9HAV7	217 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	DDX18	Q9NVP1	670 aa	Known RBP	10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	TMEM216	Q9P0N5	145 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNF180	Q9UJW8	692 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	MCTS1	Q9ULC4	181 aa	Known RBP	10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GRID1	Q9ULK0	1009 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	GPR52	Q9Y2T5	361 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	RNF115	Q9Y4L5	304 aa		10.12	□□□□□ -0.79
SNU13-208	ENST00000488571	FREM1	Q5H8C1	2179 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571		A0A087WZY1	265 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	UQCRHL	A0A096LP55	91 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	SERTM1	A2A2V5	107 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	C7orf72	A4D263	438 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	SLC35F4	A4IF30	521 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ALG1L2	C9J202	215 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	TNFSF11	O14788	317 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	NDUFS7	O75251	213 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	IMPDH1	P20839	514 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	GABRA3	P34903	492 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	CDKN1A	P38936	164 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	PSMD4	P55036	377 aa	Known RBP	10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	FOXA1	P55317	472 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	RAC1	P63000	192 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ZNHIT3	Q15649	155 aa	Predicted RBP	10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	TSC22D1	Q15714	1073 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	TAB1	Q15750	504 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ETFDH	Q16134	617 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	NCMAP	Q5T1S8	102 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ALKBH2	Q6NS38	261 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ZAR1	Q86SH2	424 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	ATG4D	Q86TL0	474 aa	Predicted RBP	10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	HIPK1	Q86Z02	1210 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	WDR75	Q8IWA0	830 aa	Known RBP	10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	GABRG1	Q8N1C3	465 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	OR4C3	Q8NH37	302 aa		10.11	□□□□□ -0.79
SNU13-208	ENST00000488571	OR2V1	Q8NHB1	315 aa		10.11	□□□□□ -0.79

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