RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 POLR1CO15160 346 aaPredicted RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 SLC16A6O15403 523 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 SEMA7AO75326 666 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 UGT2B17O75795 530 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CCNB2O95067 398 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 OXSR1O95747 527 aaPredicted RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 JMJD7P0C870 316 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 NID1P14543 1247 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 IL7RP16871 459 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 EEF1A1P68104 462 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 MYBPC1Q00872 1141 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 MC2RQ01718 297 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ROR2Q01974 943 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 GANABQ14697 944 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 NSDHLQ15738 373 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ANKRD34AQ69YU3 496 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 RBM45Q8IUH3 476 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 OR52J3Q8NH60 311 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 STT3BQ8TCJ2 826 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 DAZLQ92904 295 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 RMND5BQ96G75 393 aaPredicted RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 G6PC3Q9BUM1 346 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 TMCC3Q9ULS5 477 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 A4GNTQ9UNA3 340 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 PCDHGB5Q9Y5G0 923 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CPNE3O75131 537 aaKnown RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 UGT2B11O75310 529 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 DDAH2O95865 285 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CYC1P08574 325 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ZGLP1P0C6A0 271 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CT45A8P0DMV1 189 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CT45A9P0DMV2 189 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 PIGAP37287 484 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 EFNA3P52797 238 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 SLC37A1P57057 533 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 IL18R1Q13478 541 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 DGCR6Q14129 220 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 FIGNL1Q6PIW4 674 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 NPSR1Q6W5P4 371 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 ZNF836Q6ZNA1 936 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 OVCH1Q7RTY7 1134 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 HMGN2P46Q86SG4 172 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 SLC2A12Q8TD20 617 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 FEVQ99581 238 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 WFDC6Q9BQY6 131 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 SOX17Q9H6I2 414 aaPredicted RBP11.76□□□□□ -0.53
NELFE-209ENST00000488426 ARMC7Q9H6L4 198 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 APMAPQ9HDC9 416 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 FBXO8Q9NRD0 319 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 CHST2Q9Y4C5 530 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
NELFE-209ENST00000488426 LOC100130705A0A1B0GUX0 176 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 FAAHO00519 579 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 WT1P19544 449 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 ELAVL4P26378 380 aaKnown RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 IFNA8P32881 189 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 PEX19P40855 299 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 RGS8P57771 180 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 NPTX1Q15818 432 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 ZSWIM7Q19AV6 140 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 FLYWCH1Q4VC44 716 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 FGD3Q5JSP0 725 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 DCST1Q5T197 706 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 GALNT5Q7Z7M9 940 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 OFCC1Q8IZS5 231 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 C8orf59Q8N0T1 100 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 LINC00471Q8N535 108 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 SLC5A8Q8N695 610 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 OIT3Q8WWZ8 545 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 FNDC11Q9BVV2 318 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 ITPAQ9BY32 194 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 GABARAPL3Q9BY60 117 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 FBXO34Q9NWN3 711 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 AKAP7Q9P0M2 348 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 RHCGQ9UBD6 479 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 ENOPH1Q9UHY7 261 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 POFUT2Q9Y2G5 429 aa11.75□□□□□ -0.53
NELFE-209ENST00000488426 GPR55Q9Y2T6 319 aaPredicted RBP11.75□□□□□ -0.53
NELFE-209ENST00000488426 VSTM2BA6NLU5 285 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 ENO4A6NNW6 628 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 B4E171 279 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 TMX2-CTNND1H3BSU7 103 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 AP3D1O14617 1153 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PCDH17O14917 1159 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MITFO75030 526 aaPredicted RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 LINGO3P0C6S8 592 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms