RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCL11P51671 97 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 VLDLRP98155 873 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 SF3A2Q15428 464 aaKnown RBP1.98□□□□□ -2.09
SMC4-219ENST00000487747 UBE2V2Q15819 145 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 TMEM52BQ4KMG9 183 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 AARDQ4LEZ3 155 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 SLX4IPQ5VYV7 408 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 ZNF547Q8IVP9 402 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 OR8H3Q8N146 312 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 BPIFB2Q8N4F0 458 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 FOPNLQ96NB1 174 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 ZMAT2Q96NC0 199 aaKnown RBP1.98□□□□□ -2.09
SMC4-219ENST00000487747 RNF126Q9BV68 326 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 WFDC1Q9HC57 220 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 PIGVQ9NUD9 493 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 AKAP7Q9P0M2 348 aaPredicted RBP1.98□□□□□ -2.09
SMC4-219ENST00000487747 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 SMC3Q9UQE7 1217 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 USP16Q9Y5T5 823 aa1.98□□□□□ -2.09
SMC4-219ENST00000487747 IGHV3-64DA0A0J9YX35 117 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 GJE1A6NN92 205 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 PES1O00541 588 aaKnown RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 BUB1O43683 1085 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 RETP07949 1114 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 IGFBP3P17936 291 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 CTNNB1P35222 781 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 LONP1P36776 959 aaKnown RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 KIR2DS2P43631 304 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 DHPSP49366 369 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 NME5P56597 212 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 KARSQ15046 597 aaKnown RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 CFAP221Q4G0U5 840 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 LIPKQ5VXJ0 399 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 FAM71E1Q6IPT2 247 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 ARSKQ6UWY0 536 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 GALNTL5Q7Z4T8 443 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 GPBP1Q86WP2 473 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 ZNF615Q8N8J6 731 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 OR51G1Q8NGK1 321 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 OR9A1PQ8NGU1 263 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 GOT1L1Q8NHS2 421 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 SLC22A8Q8TCC7 542 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 TMEM158Q8WZ71 300 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 BCL2L2Q92843 193 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 ABCG4Q9H172 646 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 FAM124BQ9H5Z6 455 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 AKIRIN1Q9H9L7 192 aaPredicted RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 COPS7AQ9UBW8 275 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 MAD2L2Q9UI95 211 aa1.97□□□□□ -2.09
SMC4-219ENST00000487747 SAMD4AQ9UPU9 718 aaKnown RBP1.97□□□□□ -2.09
SMC4-219ENST00000487747 CCDC69A6NI79 296 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 STX6O43752 255 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 ATP6V1G1O75348 118 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 AKAP3O75969 853 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 TMOD1P28289 359 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 RPL4P36578 427 aaKnown RBP1.96□□□□□ -2.1
SMC4-219ENST00000487747 CSNK1DP48730 415 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 MTTPP55157 894 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 IL9RQ01113 521 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 ZP4Q12836 540 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 PRAMEF7Q5VXH5 474 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 LEG1Q6P5S2 330 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 OLFM4Q6UX06 510 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 BTNL3Q6UXE8 466 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 ZNF836Q6ZNA1 936 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 ACP7Q6ZNF0 438 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 DNM1P46Q6ZS02 220 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 HSD11B1LQ7Z5J1 315 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 SERPINA12Q8IW75 414 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 ZNF709Q8N972 641 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 COLGALT1Q8NBJ5 622 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 OR2T33Q8NG76 320 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 OR1E3Q8WZA6 343 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 MRPL9Q9BYD2 267 aaKnown RBP1.96□□□□□ -2.1
SMC4-219ENST00000487747 PLA2G12AQ9BZM1 189 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 RIMS3Q9UJD0 308 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 WDR45Q9Y484 360 aa1.96□□□□□ -2.1
SMC4-219ENST00000487747 DHX57Q6P158 1386 aaKnown RBP1.96□□□□□ -2.1
SMC4-219ENST00000487747 A0A0U1RQS6 177 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 C11orf94C9JXX5 98 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 HCN1O60741 890 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 MARCKSP29966 332 aaPredicted RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 ADSSP30520 456 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 CASP9P55211 416 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 RND3P61587 244 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 RPL8P62917 257 aaKnown RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 CCZ1BP86790 482 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 CCZ1P86791 482 aaPredicted RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 BTG3Q14201 252 aaPredicted RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 NSDHLQ15738 373 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 ACSF3Q4G176 576 aaPredicted RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 ZSCAN25Q6NSZ9 544 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 YRDCQ86U90 279 aaKnown RBP1.95□□□□□ -2.1
SMC4-219ENST00000487747 TRPV6Q9H1D0 765 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 NDUFA13Q9P0J0 144 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 STX8Q9UNK0 236 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 MAB21L2Q9Y586 359 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 SNX5Q9Y5X3 404 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 BRWD3Q6RI45 1802 aa1.95□□□□□ -2.1
SMC4-219ENST00000487747 FBLL1A6NHQ2 334 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms