RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	JADE3	Q92613	823 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	HOXB13	Q92826	284 aa	Predicted RBP	11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	C16orf58	Q96GQ5	468 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	MECR	Q9BV79	373 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	RNF122	Q9H9V4	155 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	NEUROD4	Q9HD90	331 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	UBQLN4	Q9NRR5	601 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	ELOVL5	Q9NYP7	299 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	ZNF226	Q9NYT6	803 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	SLC17A7	Q9P2U7	560 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	ATP6V1H	Q9UI12	483 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	PROCR	Q9UNN8	238 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	VDAC3	Q9Y277	283 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	TESMIN	Q9Y4I5	508 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	SNX8	Q9Y5X2	465 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	SPG11	Q96JI7	2443 aa		11.21	□□□□□ -0.61
SREBF1-215	ENST00000487401	PHF3	Q92576	2039 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401		A0A1W2PRB8	838 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	C16orf97	H3BN30	126 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	EIF1AY	O14602	144 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	SLU7	O95391	586 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	HSPA4L	O95757	839 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	NUDT17	P0C025	328 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	FCGR2A	P12318	317 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZNF17	P17021	662 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	SERPINB5	P36952	375 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	FRK	P42685	505 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	EIF1AX	P47813	144 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	PCYT1A	P49585	367 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZNF41	P51814	821 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	MLC1	Q15049	377 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	DUSP5	Q16690	384 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	TMEM44	Q2T9K0	475 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	UGT3A2	Q3SY77	523 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	SPDYE7P	Q495Y7	208 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	GLIPR1L2	Q4G1C9	344 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ATP6AP1L	Q52LC2	224 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	CPTP	Q5TA50	214 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	MISP	Q8IVT2	679 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	METTL25	Q8N6Q8	603 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	FAM110B	Q8TC76	370 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	TCP10L	Q8TDR4	215 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	OR5P2	Q8WZ92	322 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZBTB8A	Q96BR9	441 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	GIMAP5	Q96F15	307 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	WFIKKN1	Q96NZ8	548 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	PRPF18	Q99633	342 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	MED18	Q9BUE0	208 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	BTBD2	Q9BX70	525 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ANKZF1	Q9H8Y5	726 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	KLHL28	Q9NXS3	571 aa		11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	INTS1	Q8N201	2190 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-215	ENST00000487401	SCAMP2	O15127	329 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	LYPLA1	O75608	230 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	SYNGR4	O95473	234 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	PLG	P00747	810 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	CD8B	P10966	210 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	LAMP1	P11279	417 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ATP6V1C1	P21283	382 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ME2	P23368	584 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	UGT2B10	P36537	528 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	CTBP2	P56545	445 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	POU6F2	P78424	691 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	FOXD4	Q12950	439 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	LASP1	Q14847	261 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	LSM12	Q3MHD2	195 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	PDSS1	Q5T2R2	415 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	CCNJ	Q5T5M9	372 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZCCHC23	Q6ZST2	131 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	FAM214B	Q7L5A3	538 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZAR1	Q86SH2	424 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	NATD1	Q8N6N6	113 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ZNF610	Q8N9Z0	462 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	FNDC5	Q8NAU1	212 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	OR7A2P	Q8NGA2	310 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	B4GALNT2	Q8NHY0	566 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ACTRT2	Q8TDY3	377 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	FAM120B	Q96EK7	910 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	OTUB1	Q96FW1	271 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	MED17	Q9NVC6	651 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ATAD3A	Q9NVI7	634 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	GIMAP2	Q9UG22	337 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	LGALS13	Q9UHV8	139 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	MCTS1	Q9ULC4	181 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	FAF1	Q9UNN5	650 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	EMC9	Q9Y3B6	208 aa		11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-215	ENST00000487401		H3BNH8	94 aa		11.18	□□□□□ -0.62
SREBF1-215	ENST00000487401	AQP8	O94778	261 aa		11.18	□□□□□ -0.62
SREBF1-215	ENST00000487401	SOX30	O94993	753 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms