RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 OR51I1Q9H343 314 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 UBQLN3Q9H347 655 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 DSN1Q9H410 356 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 RMND5AQ9H871 391 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 EXD2Q9NVH0 621 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 GPATCH2Q9NW75 528 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 TAS2R10Q9NYW0 307 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 ZIM2Q9NZV7 527 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 MED11Q9P086 117 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 VDAC3Q9Y277 283 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 HRH3Q9Y5N1 445 aa9.3□□□□□ -0.92
NEK4-204ENST00000487068 A0A0G2JND7 137 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 A0A1B0GVC2 190 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 WIPF3A6NGB9 483 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 CCDC154A6NI56 674 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 H3BNH8 94 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 NR5A2O00482 541 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 FADS1O60427 444 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 SOX30O94993 753 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 GSNP06396 782 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 TROVE2P10155 538 aaKnown RBP eCLIP9.29□□□□□ -0.92
NEK4-204ENST00000487068 GABRA1P14867 456 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 NCF2P19878 526 aaPredicted RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 IL12AP29459 219 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 SRD5A2P31213 254 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 IDH3AP50213 366 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 ZNF41P51814 821 aaPredicted RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 POLR2JP52435 117 aaKnown RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 ADORA2A-AS1P86434 159 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 SRYQ05066 204 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 CRYZQ08257 329 aaKnown RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 C17orf67Q0P5P2 114 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 LRRC74AQ0VAA2 488 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 RCAN2Q14206 197 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 GANABQ14697 944 aaKnown RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 GPR68Q15743 365 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 AAGABQ6PD74 315 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 ZAR1Q86SH2 424 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 UBQLNLQ8IYU4 475 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 RPRMLQ8N4K4 120 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 PHOSPHO1Q8TCT1 267 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 DUSP19Q8WTR2 217 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 PHF10Q8WUB8 498 aaKnown RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 ITLN2Q8WWU7 325 aaPredicted RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 ABTB1Q969K4 478 aaPredicted RBP9.29□□□□□ -0.92
NEK4-204ENST00000487068 CCDC115Q96NT0 180 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 INPP5KQ9BT40 448 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 UGT2B28Q9BY64 529 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 OR2B2Q9GZK3 357 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 HHATLQ9HCP6 504 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 MED4Q9NPJ6 270 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 UBQLN4Q9NRR5 601 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 FBXO34Q9NWN3 711 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 BTNL2Q9UIR0 455 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 ITPR2Q14571 2701 aa9.29□□□□□ -0.92
NEK4-204ENST00000487068 FAM90A27PA6NNH2 459 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 H3BML4 177 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 GTPBP1O00178 669 aaKnown RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 ZNF195O14628 629 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 HCRTR2O43614 444 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 EDF1O60869 148 aaKnown RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 CYP7B1O75881 506 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 AGR2O95994 175 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 AK1P00568 194 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 VIMP08670 466 aaKnown RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 OR12D1P0DN82 309 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 BMP7P18075 431 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 POU3F2P20265 443 aaPredicted RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 LCN1P31025 176 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 MAP3K8P41279 467 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 CDKN2CP42773 168 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 CCR4P51679 360 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 DSCR4P56555 118 aaPredicted RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 RIPPLY3P57055 190 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 NUP107P57740 925 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 PHC1P78364 1004 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 PMPCAQ10713 525 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 SF3A3Q12874 501 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEK4-204ENST00000487068 EMC4Q5J8M3 183 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 DCST1Q5T197 706 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 SAXO2Q658L1 398 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 PPP4R4Q6NUP7 873 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 XKRXQ6PP77 449 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 CHMP1BQ7LBR1 199 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 RNF130Q86XS8 419 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 MISPQ8IVT2 679 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 ULK2Q8IYT8 1036 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 OR2M3Q8NG83 312 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 OR4C3Q8NH37 302 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 RFWD2Q8NHY2 731 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 XAGE5Q8WWM1 108 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 HOXB13Q92826 284 aaPredicted RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 RAB8BQ92930 207 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 VPS33AQ96AX1 596 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 ITCHQ96J02 903 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 TRIB1Q96RU8 372 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 CCDC28BQ9BUN5 200 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 RTN4RQ9BZR6 473 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms