RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 POLR1CO15160 346 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 IL1AP01583 271 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 CTSCP53634 463 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 HHEXQ03014 270 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 HTR3DQ70Z44 454 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ELMOD3Q96FG2 381 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ZBED3Q96IU2 234 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 DNMT3AQ9Y6K1 912 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 RAB5BP61020 215 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 GGTA1PQ4G0N0 100 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 TMEM150AQ86TG1 271 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 COMTD1Q86VU5 262 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 MEX3DQ86XN8 651 aaKnown RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 OR5L2Q8NGL0 311 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ACOT11Q8WXI4 607 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 DTD2Q96FN9 168 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 NAA11Q9BSU3 229 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 IL23AQ9NPF7 189 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ARSAP15289 507 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 SELENOVP59797 346 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-210ENST00000487017 GRM7Q14831 915 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ACSM3Q53FZ2 586 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 OR5H2Q8NGV7 314 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 OR2T11Q8NH01 316 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF417Q8TAU3 575 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 FBRSQ9HAH7 460 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 IL37Q9NZH6 218 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 IER3IP1Q9Y5U9 82 aa15.49■□□□□ 0.07
COL7A1-210ENST00000487017 FAM171A2A8MVW0 826 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 CSF1P09603 554 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 PNMTP11086 282 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 GK2Q14410 553 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SLC39A13Q96H72 371 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 C7orf50Q9BRJ6 194 aaKnown RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 LHX3Q9UBR4 397 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 UBFD1O14562 309 aaKnown RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ACOT8O14734 319 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ARPC5O15511 151 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SLC22A5O76082 557 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SYPP08247 313 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 FUT1P19526 365 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 HOXD12P35452 270 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 S100A12P80511 92 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 MRPS10P82664 201 aaKnown RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF480Q8WV37 535 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 DDIT4LQ96D03 193 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 PHB2Q99623 299 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 FN3KQ9H479 309 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 A0A1B0GV50 99 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 OR7A17O14581 309 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 C1orf105O95561 183 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 TCTE1Q5JU00 501 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 LIPIQ6XZB0 460 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 CFAP77Q6ZQR2 320 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 FAM83HQ6ZRV2 1179 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 WDR53Q7Z5U6 358 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SLC7A5P1Q8MH63 180 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SDR9C7Q8NEX9 313 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 CDS1Q92903 461 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 CWH43Q9H720 699 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ACOT7O00154 380 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ACP2P11117 423 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 SGSHP51688 502 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 GPR19Q15760 415 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 C17orf99Q6UX52 265 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 GTPBP8Q8N3Z3 284 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 RNF175Q8N4F7 328 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 GPR148Q8TDV2 347 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF583Q96ND8 569 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 POT1Q9NUX5 634 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 J3KTA2 159 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 DIRAS3O95661 229 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF26P17031 533 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 PRLHRP49683 370 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 DAPP51397 102 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 FAM205BPQ63HN1 556 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 DUS1LQ6P1R4 473 aaKnown RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 CASD1Q96PB1 797 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 TREX2Q9BQ50 279 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 OLAHQ9NV23 265 aa15.48■□□□□ 0.07
COL7A1-210ENST00000487017 USP36Q9P275 1121 aaKnown RBP15.48■□□□□ 0.07
COL7A1-210ENST00000487017 TIMP2P16035 220 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 HBA1P69905 142 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 BCL7AQ4VC05 210 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 DCST2Q5T1A1 773 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 HACD4Q5VWC8 232 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 INPP5EQ9NRR6 644 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 GMPR2Q9P2T1 348 aaKnown RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF616Q08AN1 781 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 OR13F1Q8NGS4 319 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 CDC6Q99741 560 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 A6NLC8 198 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 POU3F4P49335 361 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 RBM39Q14498 530 aaKnown RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 ADAMTS16Q8TE57 1224 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 TANKQ92844 425 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms