RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 TBC1D20Q96BZ9 403 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SDCCAG3Q96C92 435 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC138Q96M89 665 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 BAG1Q99933 345 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SARGQ9BW04 601 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 HES7Q9BYE0 225 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC68Q9H2F9 335 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CLK4Q9HAZ1 481 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC177Q9NQR7 707 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ANKRD10Q9NXR5 420 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 HCN3Q9P1Z3 774 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 RCE1Q9Y256 329 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 KLF13Q9Y2Y9 288 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 DHRS7Q9Y394 339 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 NAALAD2Q9Y3Q0 740 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 COMMD10Q9Y6G5 202 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 AKAP9Q99996 3911 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 FLNAP21333 2647 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ARID1AO14497 2285 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A1B0GTH9 108 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM237BA0A1B0GVD1 139 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 FEZF1A0PJY2 475 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CTAGE9A4FU28 777 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 SDR42E2A6NKP2 422 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 USP27XA6NNY8 438 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CHST10O43529 356 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 BUB3O43684 328 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 LCMT2O60294 686 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 GALR3O60755 368 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 AVILO75366 819 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 RDH16O75452 317 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CDC123O75794 336 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TOXO94900 526 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 STATHP02808 62 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TPOP07202 933 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 C8GP07360 202 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 FHP07954 510 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 HOXD4P09016 255 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC35G6P0C7Q6 338 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 MLNP12872 115 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 LYL1P12980 280 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 NAGAP17050 411 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ALOX12P18054 663 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CHRNB4P30926 498 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 COILP38432 576 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 MAGEA6P43360 314 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF75DP51815 510 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TBPL1P62380 186 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TFF3Q07654 80 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 SF3A3Q12874 501 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CUL1Q13616 776 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 THOC5Q13769 683 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 DHX34Q14147 1143 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 SIX1Q15475 284 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CES4AQ5XG92 561 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF470Q6ECI4 717 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 UGT3A1Q6NUS8 523 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ARHGAP11AQ6P4F7 1023 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 AGTRAPQ6RW13 159 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 LCTLQ6UWM7 567 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 C3P1Q6ZMU1 363 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 QSOX2Q6ZRP7 698 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 NCCRP1Q6ZVX7 275 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 GSTA5Q7RTV2 222 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 IGFN1Q86VF2 1251 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TMEM139Q8IV31 216 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 LMNTD2Q8IXW0 634 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM185AQ8N0U4 392 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 MARVELD2Q8N4S9 558 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TBC1D19Q8N5T2 526 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 DPP10Q8N608 796 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CPSF7Q8N684 471 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ZFP62Q8NB50 900 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 NFAM1Q8NET5 270 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 OR4K1Q8NGD4 311 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 OR5T3Q8NGG3 340 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ZCCHC10Q8TBK6 192 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 CD200R1Q8TD46 325 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 C2CD4CQ8TF44 421 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 MAIP1Q8WWC4 291 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 RND1Q92730 232 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TSLPQ969D9 159 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 KIAA1191Q96A73 305 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 GPR21Q99679 349 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 HAUS8Q9BT25 410 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 DEFB126Q9BYW3 111 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 TP63Q9H3D4 680 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 PARVBQ9HBI1 364 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 KCNJ16Q9NPI9 418 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 HOMER3Q9NSC5 361 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 KCNN3Q9UGI6 736 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 PPIEQ9UNP9 301 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 PDE10AQ9Y233 779 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 RNF6Q9Y252 685 aa3.64□□□□□ -1.83
SNRNP40-205ENST00000486941 IGKV3D-11A0A0A0MRZ8 115 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 IGHV4-28A0A0C4DH34 117 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ZCWPW2A0A1B0GU75 182 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TRBC2A0A5B9 178 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 URADA6NGE7 173 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms