RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NDRG4Q9ULP0 352 aaKnown RBP12.38□□□□□ -0.43
HMGN1-216ENST00000486741 CASC3O15234 703 aaKnown RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 AKR1D1P51857 326 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 RAB14P61106 215 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 MLF2Q15773 248 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 DUSP5Q16690 384 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 NLRP8Q86W28 1048 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 YIPF7Q8N8F6 280 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TMEM255BQ8WV15 326 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 NKD1Q969G9 470 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TMCO6Q96DC7 493 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ADOQ96SZ5 270 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 POLDIP3Q9BY77 421 aaKnown RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF443Q9Y2A4 671 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 C17orf105B2RV13 164 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 UPK1AO00322 258 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 CHRM4P08173 479 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 IRAK1BP1Q5VVH5 260 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF550Q7Z398 422 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 CEACAM19Q7Z692 300 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF619Q8N2I2 560 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 NFKBIL1Q9UBC1 381 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TMEM5Q9Y2B1 443 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 A0A1W2PS29 197 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 MT-ND5P03915 603 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PUM1Q14671 1186 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■□□□□ 9.6
HMGN1-216ENST00000486741 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 GXYLT1Q4G148 440 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PAQR6Q6TCH4 344 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 LNX2Q8N448 690 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TCF7L1Q9HCS4 588 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 CMAHPQ9Y471 501 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SLITRK5O94991 958 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 RCVRNP35243 200 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OMPP47874 163 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TFF2Q03403 129 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 GRM7Q14831 915 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OR1Q1Q15612 314 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TBCEQ15813 527 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PGBD2Q6P3X8 592 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 CCBE1Q6UXH8 406 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 TMEM151BQ8IW70 566 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SAMD12Q8N8I0 201 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OR13C2Q8NGS9 318 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 OR6N2Q8NGY6 317 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZG16BQ96DA0 208 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 KLRF1Q9NZS2 232 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF221Q9UK13 617 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 ATXN7L1Q9ULK2 861 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PMF1-BGLAPU3KQ54 211 aa12.37□□□□□ -0.43
HMGN1-216ENST00000486741 PEX12O00623 359 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 EIF1AYO14602 144 aaKnown RBP12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PRKYO43930 277 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PRSS23O95084 383 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-216ENST00000486741 NRG3P56975 720 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 KIAA0895LQ68EN5 471 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 TAPBPLQ9BX59 468 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 GPN2Q9H9Y4 310 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-216ENST00000486741 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 NANSQ9NR45 359 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 LRIT1Q9P2V4 623 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PRODH2Q9UF12 536 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 STUB1Q9UNE7 303 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 CCDC88CQ9P219 2028 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF217O75362 1048 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 ST6GAL1P15907 406 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PPP5CP53041 499 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 LIM2P55344 173 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PLCXD2Q0VAA5 305 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 FGL2Q14314 439 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 HS6ST2Q96MM7 605 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 CSF3RQ99062 836 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 G6PC3Q9BUM1 346 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 SACM1LQ9NTJ5 587 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 POT1Q9NUX5 634 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 GRHPRQ9UBQ7 328 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 SPEF1Q9Y4P9 236 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 SPTBN2O15020 2390 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-216ENST00000486741 HYKKA2RU49 373 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PRODHO43272 600 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 PLRG1O43660 514 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms