RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 OR51I1Q9H343 314 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 MTG2Q9H4K7 406 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 NANSQ9NR45 359 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 CD84Q9UIB8 345 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 PURGQ9UJV8 347 aaKnown RBP9.96□□□□□ -0.82
CCDC171-208ENST00000486641 ICKQ9UPZ9 632 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 SH2B3Q9UQQ2 575 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 PRG3Q9Y2Y8 225 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-208ENST00000486641 BACE2Q9Y5Z0 518 aa9.96□□□□□ -0.82
CCDC171-208ENST00000486641 DOCK6Q96HP0 2047 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 PRR23D1E9PI22 279 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 E9PI62 339 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 J3QRE1 110 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF197O14709 1029 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ARPC1BO15143 372 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HYAL3O43820 417 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 TBL1XO60907 577 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ADAM11O75078 769 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 PRR23D2P0DMB1 279 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GNSP15586 552 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 IMPA1P29218 277 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HTR1FP30939 366 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR1G1P47890 313 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 RAP2BP61225 183 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 MEF2AQ02078 507 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GK2Q14410 553 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 LTB4RQ15722 352 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SLC9B2Q86UD5 537 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 FAM98AQ8NCA5 519 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ABHD4Q8TB40 342 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HMGB4Q8WW32 186 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 FAM46AQ96IP4 442 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ARL6Q9H0F7 186 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ABCG4Q9H172 646 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 CWH43Q9H720 699 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SLC6A20Q9NP91 592 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 DMRT3Q9NQL9 472 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SLC39A1Q9NY26 324 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF69Q9UC07 566 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 CYB5R1Q9UHQ9 305 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 CAMK2AQ9UQM7 478 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 A0A1B0GUH1 482 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ZC3H12DA2A288 527 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GLTPD2A6NH11 291 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 FAM183AA6NL82 134 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 H7C2Y5 167 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 COCHO43405 550 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GSTZ1O43708 216 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR2A4O95047 310 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 PPP3CBP16298 524 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 MANFP55145 182 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 BDH1Q02338 343 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SLC3A1Q07837 685 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SLBPQ14493 270 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 MPP7Q5T2T1 576 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GSG1LQ6UXU4 331 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 GLDNQ6ZMI3 551 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SYT9Q86SS6 491 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 NAXDQ8IW45 347 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR5M9Q8NGP3 310 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 WFDC5Q8TCV5 224 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 RGMAQ96B86 450 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 TMEM169Q96HH4 297 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR2A7Q96R45 310 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 SMAD5Q99717 465 aaKnown RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ALG8Q9BVK2 526 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 NKX6-2Q9C056 277 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 KCNK12Q9HB15 430 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ACTR10Q9NZ32 417 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 ENTPD4Q9Y227 616 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 RCE1Q9Y256 329 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
CCDC171-208ENST00000486641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 OR2AG2A6NM03 316 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SLC38A8A6NNN8 435 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 FOXE1O00358 373 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 SLCO2B1O94956 709 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 IFNGR1P15260 489 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ATF1P18846 271 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 RAB3BP20337 219 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 MST1P26927 711 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ERVK-25P63136 954 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 FGL1Q08830 312 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 HSPB3Q12988 150 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 TSPAN31Q12999 210 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 PLD1Q13393 1074 aa9.94□□□□□ -0.82
CCDC171-208ENST00000486641 TSTA3Q13630 321 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF660Q6AZW8 331 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-208ENST00000486641 RSPO2Q6UXX9 243 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms