RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 C15orf38-AP3S2A0A0A6YYH1 394 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 CENPVL1A0A0U1RR11 272 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 PRAMEF27A3QJZ7 478 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 B4DXG7 233 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 NPIPA2E9PIF3 369 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 NPIPA3F8WFD2 350 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 H3BNH8 94 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 FBP2O00757 339 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 KIAA0513O60268 411 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 HCN1O60741 890 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 KRT34O76011 436 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 HPNP05981 417 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 BCHEP06276 602 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 CHRM4P08173 479 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 PPIBP23284 216 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 DPP4P27487 766 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 SRD5A2P31213 254 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 PTGS2P35354 604 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 KCNC4Q03721 635 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 RGNQ15493 299 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 REP15Q6BDI9 236 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 DLEU7Q6UYE1 221 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 MTDHQ86UE4 582 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 CHERPQ8IWX8 916 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 ZNF619Q8N2I2 560 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 DPP10Q8N608 796 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 POU5F2Q8N7G0 328 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 OR2M3Q8NG83 312 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 OR14L1PQ8NHC6 308 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 PHOSPHO1Q8TCT1 267 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 DTNBP1Q96EV8 351 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 TRNT1Q96Q11 434 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 CGREF1Q99674 301 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 TRIM8Q9BZR9 551 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 ACKR4Q9NPB9 350 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 POLE3Q9NRF9 147 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 P2RX2Q9UBL9 471 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 TINAGQ9UJW2 476 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 RPH3AQ9Y2J0 694 aaPredicted RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 DTNAQ9Y4J8 743 aa10.78□□□□□ -0.68
HPS4-214ENST00000485842 FASNP49327 2511 aaKnown RBP10.78□□□□□ -0.68
HPS4-214ENST00000485842 A0A1W2PQD3 144 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 TMEM247A6NEH6 219 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 BBIP1A8MTZ0 92 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 EVPLLA8MZ36 301 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 NPIPB9F8W1W9 429 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 GTPBP1O00178 669 aaKnown RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 AQP7O14520 342 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 MRASO14807 208 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 SLC22A2O15244 555 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 OIP5O43482 229 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 HCRTR2O43614 444 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 NUDT7P0C024 238 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 HK1P19367 917 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 ENDOUP21128 410 aaKnown RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 ADSLP30566 484 aaPredicted RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 GCKP35557 465 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 MAGEA8P43361 318 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CCR4P51679 360 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CASP6P55212 293 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 MTPNP58546 118 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 ZNF117Q03924 483 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CHRNEQ04844 493 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 GTF3C1Q12789 2109 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 FADDQ13158 208 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CYLC2Q14093 348 aaPredicted RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 CAPRIN1Q14444 709 aaKnown RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 C3AR1Q16581 482 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 ZNF630Q2M218 657 aaPredicted RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 TRMT5Q32P41 509 aaKnown RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 NDUFAF6Q330K2 333 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 KLHL26Q53HC5 615 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 RPS26P11Q5JNZ5 115 aaPredicted RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 TMCO5AQ8N6Q1 288 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 FADS6Q8N9I5 356 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 NEIL3Q8TAT5 605 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 FAM57AQ8TBR7 257 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 TMEM19Q96HH6 336 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CPPED1Q9BRF8 314 aaPredicted RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 OR2B2Q9GZK3 357 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 QRSL1Q9H0R6 528 aaKnown RBP10.77□□□□□ -0.69
HPS4-214ENST00000485842 IKZF5Q9H5V7 419 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 RUBCNLQ9H714 662 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 HHATLQ9HCP6 504 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 TAS2R10Q9NYW0 307 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 KCNE5Q9UJ90 142 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 ACAD8Q9UKU7 415 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 CORO2BQ9UQ03 480 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 ZNF835Q9Y2P0 537 aa10.77□□□□□ -0.69
HPS4-214ENST00000485842 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
HPS4-214ENST00000485842 PCNX3Q9H6A9 2034 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms