RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 DDIASQ8IXT1 998 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 ANKRD42Q8N9B4 389 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 CDRT4Q8N9R6 151 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 FNDC5Q8NAU1 212 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SLC16A11Q8NCK7 471 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 NAXEQ8NCW5 288 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 CHDHQ8NE62 594 aaPredicted RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 NUP43Q8NFH3 380 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 OR9I1Q8NGQ6 314 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 NEIL3Q8TAT5 605 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SFXN5Q8TD22 340 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 MGARPQ8TDB4 240 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 MOAP1Q96BY2 351 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 PPCDCQ96CD2 204 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 TUBGCP3Q96CW5 907 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 CCDC120Q96HB5 630 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 MEGF10Q96KG7 1140 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 RILPQ96NA2 401 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 CCDC115Q96NT0 180 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 COL21A1Q96P44 957 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 OR52B2Q96RD2 323 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 BBS4Q96RK4 519 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 EBF4Q9BQW3 602 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 RSRP1Q9BUV0 290 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SSBP4Q9BWG4 385 aaPredicted RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 NUF2Q9BZD4 464 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 OR2B2Q9GZK3 357 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 PRDM14Q9GZV8 571 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SLC6A15Q9H2J7 730 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 PIGUQ9H490 435 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 ZNF385DQ9H6B1 395 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 WDR55Q9H6Y2 383 aaPredicted RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 CXorf36Q9H7Y0 433 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SERHLQ9NQF3 203 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 SDR39U1Q9NRG7 319 aaPredicted RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 AIG1Q9NVV5 245 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 TMEM45AQ9NWC5 275 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 FAM120CQ9NX05 1096 aaKnown RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 MARCOQ9UEW3 520 aaPredicted RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 BCAP29Q9UHQ4 241 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 KCNE5Q9UJ90 142 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 CBLCQ9ULV8 474 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 ABCG2Q9UNQ0 655 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 C15orf41Q9Y2V0 281 aa5.2□□□□□ -1.58
CUX1-208ENST00000485792 YLPM1P49750 1951 aaKnown RBP5.2□□□□□ -1.58
CUX1-208ENST00000485792 RTTNQ86VV8 2226 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 A0A1W2PQD3 144 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 A0A1W2PRB8 838 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 A1L4Q6 167 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 PRAMEF25A6NGN4 478 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 TRPC5OSA6NMA1 111 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 ALG1L2C9J202 215 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 BCKDKO14874 412 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 TFECO14948 347 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 ZG16O60844 167 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CBR3O75828 277 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 TOXO94900 526 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 KCNK2O95069 426 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 AGFG2O95081 481 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CYP4B1P13584 511 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CPN1P15169 458 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 IGFBP2P18065 325 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 KLK2P20151 261 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 TBXA2RP21731 343 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 PSMA4P25789 261 aaKnown RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 EPHA3P29320 983 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CEACAM8P31997 349 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 PTGS2P35354 604 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 HPCAL1P37235 193 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 MAGEA8P43361 318 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 DLX5P56178 289 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 PPP2R2AP63151 447 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 RPP38P78345 283 aaKnown RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 MRPS22P82650 360 aaKnown RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 PLCXD2Q0VAA5 305 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CD226Q15762 336 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 DUSP5Q16690 384 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 LSM12Q3MHD2 195 aaKnown RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 GLYR1Q49A26 553 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 GXYLT1Q4G148 440 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CPTPQ5TA50 214 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 OR4F3Q6IEY1 312 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CDC73Q6P1J9 531 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 MTFR2Q6P444 385 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 XKRXQ6PP77 449 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 PAOXQ6QHF9 649 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 RPTNQ6XPR3 784 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 COMTD1Q86VU5 262 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 PLCZ1Q86YW0 608 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 FUNDC1Q8IVP5 155 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 SLC44A2Q8IWA5 706 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 MSRB3Q8IXL7 192 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 ZNF808Q8N4W9 903 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 GLB1L3Q8NCI6 653 aaPredicted RBP5.19□□□□□ -1.58
CUX1-208ENST00000485792 FAM13CQ8NE31 585 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 OR5M3Q8NGP4 307 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 OR4C3Q8NH37 302 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 ZFP28Q8NHY6 868 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CDC26Q8NHZ8 85 aa5.19□□□□□ -1.58
CUX1-208ENST00000485792 CKAP2Q8WWK9 683 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms