RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SYNGR4O95473 234 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 ALOX5P09917 674 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 LINC00032P0C843 101 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 MAPK1P28482 360 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 PRIM2P49643 509 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 CTBP2P56545 445 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 CLDN15P56746 228 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 NKX6-1P78426 367 aaPredicted RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 PRR5P85299 388 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 CLEC9AQ6UXN8 241 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 R3HCC1LQ7Z5L2 792 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 BTLAQ7Z6A9 289 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 TDRPQ86YL5 185 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 P3H2Q8IVL5 708 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 C10orf107Q8IVU9 208 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 EIF1ADQ8N9N8 165 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 CLHC1Q8NHS4 586 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 FNDC9Q8TBE3 224 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 PIK3IP1Q96FE7 263 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 ZC3HAV1LQ96H79 300 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 TRMOQ9BU70 441 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 C12orf65Q9H3J6 166 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 EML4Q9HC35 981 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 PAQR5Q9NXK6 330 aaPredicted RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 KLHL28Q9NXS3 571 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 C6orf203Q9P0P8 240 aaPredicted RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
UBA3-210ENST00000485424 TMED5Q9Y3A6 229 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 ZNF175Q9Y473 711 aa11.93□□□□□ -0.5
UBA3-210ENST00000485424 TMEM114B3SHH9 223 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 SCDO00767 359 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 OXSR1O95747 527 aaPredicted RBP11.92□□□□□ -0.5
UBA3-210ENST00000485424 HEXAP06865 529 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 ZNF17P17021 662 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 SDC1P18827 310 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 ME2P23368 584 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 HPCAL1P37235 193 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 RPL3P39023 403 aaKnown RBP11.92□□□□□ -0.5
UBA3-210ENST00000485424 SERPINB4P48594 390 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 KIAA0040Q15053 153 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 EXOC3L2Q2M3D2 409 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 SHEQ5VZ18 495 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 GALNT10Q86SR1 603 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 WDR75Q8IWA0 830 aaKnown RBP11.92□□□□□ -0.5
UBA3-210ENST00000485424 COX18Q8N8Q8 333 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 GATSQ8NAP1 163 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 OR6Y1Q8NGX8 325 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 FBXO30Q8TB52 745 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 ARSGQ96EG1 525 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 RTN4RQ9BZR6 473 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 KLHL4Q9C0H6 718 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 RNF122Q9H9V4 155 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 ACSS1Q9NUB1 689 aaPredicted RBP11.92□□□□□ -0.5
UBA3-210ENST00000485424 PTGDR2Q9Y5Y4 395 aa11.92□□□□□ -0.5
UBA3-210ENST00000485424 A0A087WZY1 265 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 B4DXG7 233 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 H0YC42 278 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 SIAH2O43255 324 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 CTIFO43310 598 aaKnown RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 SMPD2O60906 423 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 NKX2-2O95096 273 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 HSPA4LO95757 839 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 CD8BP10966 210 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 ATP6V1C1P21283 382 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 FPR1P21462 350 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 UGT2B10P36537 528 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 CLDN20P56880 219 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 OCRLQ01968 901 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 IFFO1Q0D2I5 559 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 PCLAFQ15004 111 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 RFTN2Q52LD8 501 aaPredicted RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 Q5PR19 223 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 ZCCHC12Q6PEW1 402 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 LRIG3Q6UXM1 1119 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 EXOC3L1Q86VI1 746 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 MISPQ8IVT2 679 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 METTL25Q8N6Q8 603 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 TWIST2Q8WVJ9 160 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBA3-210ENST00000485424 PIGTQ969N2 578 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 ZBTB8AQ96BR9 441 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 MTERF3Q96E29 417 aa11.91□□□□□ -0.5
UBA3-210ENST00000485424 ZNF764Q96H86 408 aaPredicted RBP11.91□□□□□ -0.5
UBA3-210ENST00000485424 REXO5Q96IC2 774 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms