RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SKA3Q8IX90 412 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 ZNF100Q8IYN0 542 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 ALLCQ8N6M5 410 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 DCAF4L2Q8NA75 395 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 DQX1Q8TE96 717 aaKnown RBP2.93□□□□□ -1.94
CCDC66-219ENST00000484441 ANKRD49Q8WVL7 239 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 CAB39LQ9H9S4 337 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 KCNN3Q9UGI6 736 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 GMPPBQ9Y5P6 360 aa2.93□□□□□ -1.94
CCDC66-219ENST00000484441 PLEKHG1Q9ULL1 1385 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 A0A1B0GUA9 196 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 TUBAL3A6NHL2 446 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 USP27XA6NNY8 438 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 ABCD4O14678 606 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 ALOX5P09917 674 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 GCFC2P16383 781 aaKnown RBP2.92□□□□□ -1.94
CCDC66-219ENST00000484441 HTR5AP47898 357 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 PPOXP50336 477 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 HNRNPA3P51991 378 aaKnown RBP2.92□□□□□ -1.94
CCDC66-219ENST00000484441 FUT7Q11130 342 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 SNX1Q13596 522 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 CDKN3Q16667 212 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 ZNF630Q2M218 657 aaPredicted RBP2.92□□□□□ -1.94
CCDC66-219ENST00000484441 SLC39A4Q6P5W5 647 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 HSD11B1LQ7Z5J1 315 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 SYVN1Q86TM6 617 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 BATF2Q8N1L9 274 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 NEK11Q8NG66 645 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 OR52E1Q8NGJ3 308 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 URGCPQ8TCY9 931 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 NRTNQ99748 197 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 GPN2Q9H9Y4 310 aaPredicted RBP2.92□□□□□ -1.94
CCDC66-219ENST00000484441 APMAPQ9HDC9 416 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 TRPV5Q9NQA5 729 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 CD274Q9NZQ7 290 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 PRG3Q9Y2Y8 225 aaPredicted RBP2.92□□□□□ -1.94
CCDC66-219ENST00000484441 CDH10Q9Y6N8 788 aa2.92□□□□□ -1.94
CCDC66-219ENST00000484441 RNF222A6NCQ9 220 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 SLC9B1P1A6NJY1 282 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 EFNA2O43921 213 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 SUPT7LO94864 414 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 OR8U8P0C7N1 319 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 VDRP11473 427 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 PRDX2P32119 198 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 COPB2P35606 906 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 LRRC63Q05C16 580 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 TFDP1Q14186 410 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 MYDGFQ969H8 173 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 TMEM121Q9BTD3 319 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 COG4Q9H9E3 785 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 GDAP2Q9NXN4 497 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 RIMS3Q9UJD0 308 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 WDR45Q9Y484 360 aa2.91□□□□□ -1.94
CCDC66-219ENST00000484441 IGLV3-16A0A075B6K0 115 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 SMIM28A0A1B0GU29 152 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 PSMB11A5LHX3 300 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 TRAF3IP2O43734 574 aaPredicted RBP2.9□□□□□ -1.95
CCDC66-219ENST00000484441 H2AFXP16104 143 aaPredicted RBP2.9□□□□□ -1.95
CCDC66-219ENST00000484441 CTRLP40313 264 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 CFAP221Q4G0U5 840 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 C1QTNF12Q5T7M4 302 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 NEK5Q6P3R8 708 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 OR2AP1Q8NGE2 309 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 OR9A1PQ8NGU1 263 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 DCUN1D4Q92564 292 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 ATP6V0BQ99437 205 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 CHRDL1Q9BU40 450 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 COMMD4Q9H0A8 199 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 NXF3Q9H4D5 531 aaKnown RBP2.9□□□□□ -1.95
CCDC66-219ENST00000484441 ZDHHC11Q9H8X9 412 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 FANCFQ9NPI8 374 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 MMP26Q9NRE1 261 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 P2RX2Q9UBL9 471 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 IL20RAQ9UHF4 553 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 SMC3Q9UQE7 1217 aa2.9□□□□□ -1.95
CCDC66-219ENST00000484441 MTCL1Q9Y4B5 1905 aaKnown RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 MAGEB4O15481 346 aaPredicted RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 WISP3O95389 354 aaPredicted RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 TOP1P11387 765 aaKnown RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 AHCYP23526 432 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 AKT2P31751 481 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 DHPSP49366 369 aaPredicted RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 LINC00315P59091 139 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 TIMM10P62072 90 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 KCTD19Q17RG1 926 aaPredicted RBP2.89□□□□□ -1.95
CCDC66-219ENST00000484441 TMEM52BQ4KMG9 183 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 CYB5R2Q6BCY4 276 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 ETFRF1Q6IPR1 90 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 DNM1P46Q6ZS02 220 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 Q7L0L9 218 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 TAF8Q7Z7C8 310 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 C20orf203Q8NBC4 194 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 SUMF2Q8NBJ7 301 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 SPC24Q8NBT2 197 aa2.89□□□□□ -1.95
CCDC66-219ENST00000484441 CCNYQ8ND76 341 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms