RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 DNAJC14Q6Y2X3 702 aaPredicted RBP14.44□□□□□ -0.1
UPF3A-208ENST00000484246 C16orf62Q7Z3J2 963 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 GALNT10Q86SR1 603 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 MARCH3Q86UD3 253 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 FJX1Q86VR8 437 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 C1GALT1C1Q96EU7 318 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 PRDM14Q9GZV8 571 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 TPT1P8Q9HAU6 139 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 USP9XQ93008 2570 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 TRBV5-3A0A0A0MS03 114 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 C7orf72A4D263 438 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 C17orf51A8MQB3 221 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 NPIPA2E9PIF3 369 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 NPIPA3F8WFD2 350 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 CCL21O00585 134 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 ZIC3O60481 467 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 TRAPPC6AO75865 159 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 C1QCP02747 245 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 OR12D1P0DN82 309 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 BMP2P12643 396 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GABRA1P14867 456 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 HPGDP15428 266 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 AGAP20933 346 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 CHMP24386 653 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DPP4P27487 766 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GCKP35557 465 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 ARFIP2P53365 341 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 SUMO3P55854 103 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GFRA1P56159 465 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF630Q2M218 657 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 TMEM44Q2T9K0 475 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GLYR1Q49A26 553 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GTDC1Q4AE62 458 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 GXYLT1Q4G148 440 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 WIPI1Q5MNZ9 446 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 C6orf10Q5SRN2 563 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 WLSQ5T9L3 541 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 SLC2A7Q6PXP3 512 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 PM20D2Q8IYS1 436 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DPP10Q8N608 796 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DUSP19Q8WTR2 217 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 PMM1Q92871 262 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 ROPN1LQ96C74 230 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 CCDC120Q96HB5 630 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 PSMG3-AS1Q96PY0 264 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 TRNT1Q96Q11 434 aaKnown RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DSN1Q9H410 356 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 EXO5Q9H790 373 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 PTGES2Q9H7Z7 377 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 THUMPD1Q9NXG2 353 aaKnown RBP14.43□□□□□ -0.1
UPF3A-208ENST00000484246 TAS2R10Q9NYW0 307 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DKKL1Q9UK85 242 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 FLNCQ14315 2725 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 HIVEP3Q5T1R4 2406 aa14.43□□□□□ -0.1
UPF3A-208ENST00000484246 DOPEY1Q5JWR5 2465 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 LRRK2Q5S007 2527 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 A0A087WZY1 265 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 C15orf38-AP3S2A0A0A6YYH1 394 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 PRAMEF27A3QJZ7 478 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 H3BNH8 94 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 LINC01387J3KSC0 135 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ZNHIT1O43257 154 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ANP32DO95626 131 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 NCF2P19878 526 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ACVR2AP27037 513 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ADSLP30566 484 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ADH7P40394 386 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 B3GALT5-AS1P59052 145 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 FADDQ13158 208 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 STX5Q13190 355 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 CD226Q15762 336 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 COX20Q5RI15 118 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 OR5M10Q6IEU7 315 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 TYW3Q6IPR3 259 aaKnown RBP14.42□□□□□ -0.1
UPF3A-208ENST00000484246 FRRS1Q6ZNA5 592 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 YRDCQ86U90 279 aaKnown RBP14.42□□□□□ -0.1
UPF3A-208ENST00000484246 IFNEQ86WN2 208 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 MSRB3Q8IXL7 192 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF619Q8N2I2 560 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 TOR1AIP2Q8NFQ8 470 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 OR14L1PQ8NHC6 308 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 C10orf82Q8WW14 230 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 XAGE5Q8WWM1 108 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 RAB8BQ92930 207 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 TIMP4Q99727 224 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 UGT2B28Q9BY64 529 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 RAD21L1Q9H4I0 556 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 PNPLA3Q9NST1 481 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 SLC25A37Q9NYZ2 338 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 WDR45Q9Y484 360 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 DTNAQ9Y4J8 743 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 PCDHB14Q9Y5E9 798 aa14.42□□□□□ -0.1
UPF3A-208ENST00000484246 SLC22A2O15244 555 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 FCMRO60667 390 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 UGT2B17O75795 530 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 CPN1P15169 458 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF17P17021 662 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 BMP7P18075 431 aa14.41□□□□□ -0.1
UPF3A-208ENST00000484246 PPIBP23284 216 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms