RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RNF138Q8WVD3 245 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 TMEM38AQ9H6F2 299 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SPAG4Q9NPE6 437 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ADA2Q9NZK5 511 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 PPP4R1LQ9P1A2 415 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ANAPC2Q9UJX6 822 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 BOKQ9UMX3 212 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 CLDN24A6NM45 220 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 EIF4E1BA6NMX2 242 aaKnown RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ALG1L2C9J202 215 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 NPIPB9F8W1W9 429 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ADAM10O14672 748 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SNX4O95219 450 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF24P17028 368 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 GZMMP51124 257 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 MNAT1P51948 309 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 GAS1P54826 345 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 FOXO1Q12778 655 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 GNA13Q14344 377 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 NDUFAF6Q330K2 333 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 RNFT1Q5M7Z0 435 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 FNDC7Q5VTL7 733 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 RPUSD3Q6P087 351 aaKnown RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 TMEM81Q6P7N7 255 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 FAM180AQ6UWF9 173 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 RINLQ6ZS11 566 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 DEFB107AQ8IZN7 70 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ZFP62Q8NB50 900 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 PHOSPHO1Q8TCT1 267 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SNRNP40Q96DI7 357 aaKnown RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SH3YL1Q96HL8 342 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 GNRHR2Q96P88 292 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 HOXD1Q9GZZ0 328 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SAP130Q9H0E3 1048 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 CALML5Q9NZT1 146 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 FAM208BQ5VWN6 2430 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 B4DXG7 233 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 TRIM3O75382 744 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-224ENST00000483359 PGM3O95394 542 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 NGFRP08138 427 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 RFPL3SP0C7P2 107 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 LCN1P31025 176 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 LIPEQ05469 1076 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF630Q2M218 657 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-224ENST00000483359 REEP3Q6NUK4 255 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-224ENST00000483359 PGAM4Q8N0Y7 254 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 WDSUB1Q8N9V3 476 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 OR1J4Q8NGS1 313 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 DUSP19Q8WTR2 217 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 ARSGQ96EG1 525 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 TMEM41AQ96HV5 264 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 ALG2Q9H553 416 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 ZFP64Q9NPA5 681 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 ANGPT4Q9Y264 503 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 DTNAQ9Y4J8 743 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 DSPPQ9NZW4 1301 aa16.28■□□□□ 0.2
CPNE1-224ENST00000483359 TFECO14948 347 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-224ENST00000483359 MAGEA5P43359 124 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 INAQ16352 499 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 VMACQ2NL98 169 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 KLHL26Q53HC5 615 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 C16orf89Q6UX73 402 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 CALHM3Q86XJ0 350 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 OR2T12Q8NG77 320 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 BBS10Q8TAM1 723 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 REXO5Q96IC2 774 aaKnown RBP16.27■□□□□ 0.2
CPNE1-224ENST00000483359 ASF1BQ9NVP2 202 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 FBXL2Q9UKC9 423 aa16.27■□□□□ 0.2
CPNE1-224ENST00000483359 SNPHO15079 494 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 CYP7B1O75881 506 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 C1QL1O75973 258 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 IL7RP16871 459 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 TCEA1P23193 301 aaKnown RBP16.27■□□□□ 0.19
CPNE1-224ENST00000483359 CPOXP36551 454 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 PPIAP62937 165 aaKnown RBP16.27■□□□□ 0.19
CPNE1-224ENST00000483359 TOMM20Q15388 145 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF141Q15928 474 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 PRICKLE2Q7Z3G6 844 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 VRK2Q86Y07 508 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 TMEM251Q8N6I4 163 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 HIPK4Q8NE63 616 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF703Q9H7S9 590 aaPredicted RBP16.27■□□□□ 0.19
CPNE1-224ENST00000483359 MTHFD2LQ9H903 347 aaPredicted RBP16.27■□□□□ 0.19
CPNE1-224ENST00000483359 MED11Q9P086 117 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 ABCD2Q9UBJ2 740 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 NCKAP5O14513 1909 aa16.27■□□□□ 0.19
CPNE1-224ENST00000483359 A0A0G2JPF8 293 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 SERINC4A6NH21 518 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 AGAP5A6NIR3 686 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 FAM220BPB1ANY3 271 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 HNRNPCL2B2RXH8 293 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 HNRNPCL3B7ZW38 293 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 ACOT7O00154 380 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 HNRNPCL1O60812 293 aaKnown RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 BCAS1O75363 584 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 OPN1SWP03999 348 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 HNRNPCL4P0DMR1 293 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms