RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZNHIT3Q15649 155 aaPredicted RBP12.44□□□□□ -0.42
VARS-226ENST00000483275 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.44□□□□□ -0.42
VARS-226ENST00000483275 ZNF385BQ569K4 471 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 IFT20Q8IY31 132 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 OR6K3Q8NGY3 331 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 CLHC1Q8NHS4 586 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.44□□□□□ -0.42
VARS-226ENST00000483275 GPR151Q8TDV0 419 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 TMEM171Q8WVE6 324 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 CAVIN3Q969G5 261 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 L3HYPDHQ96EM0 354 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 ADGRG7Q96K78 797 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
VARS-226ENST00000483275 FBXO34Q9NWN3 711 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 EMCNQ9ULC0 261 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 HS3ST1O14792 307 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 AKAP10O43572 662 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 SS18L1O75177 396 aaPredicted RBP12.43□□□□□ -0.42
VARS-226ENST00000483275 OXSR1O95747 527 aaPredicted RBP12.43□□□□□ -0.42
VARS-226ENST00000483275 ACP2P11117 423 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 PYGBP11216 843 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 CLK3P49761 638 aaKnown RBP12.43□□□□□ -0.42
VARS-226ENST00000483275 PRR5P85299 388 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 FGFBP1Q14512 234 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 PLPPR5Q32ZL2 321 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 MFSD12Q6NUT3 480 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 NOXRED1Q6NXP6 359 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 ROBO4Q8WZ75 1007 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 AKAP1Q92667 903 aaKnown RBP eCLIP12.43□□□□□ -0.42
VARS-226ENST00000483275 NEUROG1Q92886 237 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 GMPPAQ96IJ6 420 aaPredicted RBP12.43□□□□□ -0.42
VARS-226ENST00000483275 C12orf65Q9H3J6 166 aaKnown RBP12.43□□□□□ -0.42
VARS-226ENST00000483275 TBK1Q9UHD2 729 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
VARS-226ENST00000483275 IGLV3-32A0A0A0MS00 114 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 A0A0J9YW62 118 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 A0A1W2PRB8 838 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 LINC01387J3KSC0 135 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CLOCKO15516 846 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 PDPK1O15530 556 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 OIP5O43482 229 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 NDUFB5O43674 189 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CRCPO75575 148 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 KCNH1O95259 989 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 AGTR1P30556 359 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 GPC1P35052 558 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 SFTPDP35247 375 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 SLC18A2Q05940 514 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 C17orf67Q0P5P2 114 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 VEZF1Q14119 521 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CD226Q15762 336 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CCNJQ5T5M9 372 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 HBMQ6B0K9 141 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CLEC6AQ6EIG7 209 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
VARS-226ENST00000483275 LSRQ86X29 649 aaPredicted RBP12.42□□□□□ -0.42
VARS-226ENST00000483275 SLC22A9Q8IVM8 553 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 WDR75Q8IWA0 830 aaKnown RBP12.42□□□□□ -0.42
VARS-226ENST00000483275 OR2V1Q8NHB1 315 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 POC1BQ8TC44 478 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 ABHD3Q8WU67 409 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 S100PBPQ96BU1 408 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 CXorf56Q9H5V9 222 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 ZNF701Q9NV72 531 aaPredicted RBP12.42□□□□□ -0.42
VARS-226ENST00000483275 MED17Q9NVC6 651 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 SIRT5Q9NXA8 310 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 MCTS1Q9ULC4 181 aaKnown RBP12.42□□□□□ -0.42
VARS-226ENST00000483275 NFU1Q9UMS0 254 aa12.42□□□□□ -0.42
VARS-226ENST00000483275 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 G3V2L1 256 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 SYNGR4O95473 234 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 ZNF17P17021 662 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 PSMA4P25789 261 aaKnown RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 CDKN1AP38936 164 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 PRIM2P49643 509 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 ZNF41P51814 821 aaPredicted RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 FOXF1Q12946 379 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 DUSP5Q16690 384 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 GLYR1Q49A26 553 aaPredicted RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 SH2D5Q6ZV89 423 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 GTPBP8Q8N3Z3 284 aaPredicted RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 SLC16A11Q8NCK7 471 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 JADE3Q92613 823 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 C16orf58Q96GQ5 468 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 TAS2R7Q9NYW3 318 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 PLCE1Q9P212 2302 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 MRTO4Q9UKD2 239 aaKnown RBP12.41□□□□□ -0.42
VARS-226ENST00000483275 GRID1Q9ULK0 1009 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms