RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 C16orf62Q7Z3J2 963 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 MIPOL1Q8TD10 442 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 SDCCAG3Q96C92 435 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 NEURL3Q96EH8 262 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 THOC1Q96FV9 657 aaKnown RBP16.7■□□□□ 0.26
SMIM4-204ENST00000482728 SFXN2Q96NB2 322 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 SDF2Q99470 211 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 OR51I1Q9H343 314 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 MED4Q9NPJ6 270 aa16.7■□□□□ 0.26
SMIM4-204ENST00000482728 RPH3AQ9Y2J0 694 aaPredicted RBP16.7■□□□□ 0.26
SMIM4-204ENST00000482728 GMFGO60234 142 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 EDF1O60869 148 aaKnown RBP16.69■□□□□ 0.26
SMIM4-204ENST00000482728 STX11O75558 287 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 ANP32DO95626 131 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 OR12D1P0DN82 309 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 MSX1P28360 303 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 KHKP50053 298 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 ANXA11P50995 505 aaKnown RBP16.69■□□□□ 0.26
SMIM4-204ENST00000482728 NUP107P57740 925 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 GANABQ14697 944 aaKnown RBP16.69■□□□□ 0.26
SMIM4-204ENST00000482728 TNFAIP8L2Q6P589 184 aaPredicted RBP16.69■□□□□ 0.26
SMIM4-204ENST00000482728 MISPQ8IVT2 679 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 MARVELD2Q8N4S9 558 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 GATSQ8NAP1 163 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 OR9I1Q8NGQ6 314 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 CA5BP1Q8WTZ4 195 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 ASB5Q8WWX0 329 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 RAB8BQ92930 207 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 ITCHQ96J02 903 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 TTYH2Q9BSA4 534 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 SERHL2Q9H4I8 314 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 DCTN4Q9UJW0 460 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 PHF3Q92576 2039 aaKnown RBP16.69■□□□□ 0.26
SMIM4-204ENST00000482728 PCNX3Q9H6A9 2034 aa16.69■□□□□ 0.26
SMIM4-204ENST00000482728 NCOA6Q14686 2063 aaPredicted RBP16.68■□□□□ 0.26
SMIM4-204ENST00000482728 IGLV3-32A0A0A0MS00 114 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 A0A1W2PQD3 144 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 FAM47E-STBD1D6RA91 191 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 PRSS44E7EML9 344 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 ATP8B1O43520 1251 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 CLDN14O95500 239 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 KRT75O95678 551 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 GLI4P10075 376 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 DCTP40126 519 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 ATP12AP54707 1039 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 ARHGAP11BQ3KRB8 267 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 TIGD2Q4W5G0 525 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 C6orf10Q5SRN2 563 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 RAET1LQ5VY80 246 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 RTL6Q6ICC9 239 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 MSANTD1Q6ZTZ1 278 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 RNF130Q86XS8 419 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 CHDHQ8NE62 594 aaPredicted RBP16.68■□□□□ 0.26
SMIM4-204ENST00000482728 PHOSPHO1Q8TCT1 267 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 VPS33AQ96AX1 596 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 C1GALT1C1Q96EU7 318 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 WDYHV1Q96HA8 205 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 PRDM14Q9GZV8 571 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 NPHS2Q9NP85 383 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 FAM215AQ9Y5M1 114 aa16.68■□□□□ 0.26
SMIM4-204ENST00000482728 CENPEQ02224 2701 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 NPIPA5A0A0B4J1W7 369 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 B4DXG7 233 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 NPIPA7E9PJI5 369 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 GTPBP1O00178 669 aaKnown RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 NPIPA8P0DM63 369 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 CPN1P15169 458 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 NCF2P19878 526 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 CHMP24386 653 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 HTR1EP28566 365 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 CDKN2CP42773 168 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 MRPL19P49406 292 aaKnown RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 STARP49675 285 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 GFRA1P56159 465 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 IRX1P78414 480 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 SRYQ05066 204 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 RCAN2Q14206 197 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 GPR68Q15743 365 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 ZNF630Q2M218 657 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 GLYR1Q49A26 553 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 KLHL26Q53HC5 615 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 MTERF4Q7Z6M4 381 aaKnown RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 ZNF614Q8N883 585 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 SH3YL1Q96HL8 342 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 TRIM33Q9UPN9 1127 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 RNF6Q9Y252 685 aa16.67■□□□□ 0.26
SMIM4-204ENST00000482728 KLF2Q9Y5W3 355 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-204ENST00000482728 A0A0G2JND7 137 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 H0Y3Z8 333 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 LINC01387J3KSC0 135 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 HCRTR2O43614 444 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 EPPINO95925 133 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 COL8A1P27658 744 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 CHRNB4P30926 498 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 TXNL4AP83876 142 aaKnown RBP16.66■□□□□ 0.26
SMIM4-204ENST00000482728 DCST1Q5T197 706 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 HEPHL1Q6MZM0 1159 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms