RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KLHL26Q53HC5 615 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 WLSQ5T9L3 541 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 CD163Q86VB7 1156 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 TSPEARQ8WU66 669 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 NMUR2Q9GZQ4 415 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 POLE3Q9NRF9 147 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 SPRR3Q9UBC9 169 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 TNFRSF10DQ9UBN6 386 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 SUCOQ9UBS9 1254 aaKnown RBP19.02■□□□□ 0.64
SEC13-217ENST00000482647 NDUFAF1Q9Y375 327 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 HIVEP3Q5T1R4 2406 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 NPIPB9F8W1W9 429 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 MSX1P28360 303 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 CRATP43155 626 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 HPCAP84074 193 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 GANABQ14697 944 aaKnown RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 GPR68Q15743 365 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 GTDC1Q4AE62 458 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 NHSL2Q5HYW2 709 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 PAGE3Q5JUK9 113 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 COX20Q5RI15 118 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.01■□□□□ 0.63
SEC13-217ENST00000482647 MTERF4Q7Z6M4 381 aaKnown RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 GATSQ8NAP1 163 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 OR5M9Q8NGP3 310 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 SSC4DQ8WTU2 575 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 TRNT1Q96Q11 434 aaKnown RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 ZNF350Q9GZX5 532 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 TP63Q9H3D4 680 aaPredicted RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 RAD21L1Q9H4I0 556 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 PNPLA3Q9NST1 481 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 THUMPD1Q9NXG2 353 aaKnown RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 LEF1Q9UJU2 399 aaPredicted RBP19.01■□□□□ 0.63
SEC13-217ENST00000482647 MKLN1Q9UL63 735 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 MEMO1Q9Y316 297 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 SLC6A5Q9Y345 797 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 WDR45Q9Y484 360 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 DTNAQ9Y4J8 743 aa19.01■□□□□ 0.63
SEC13-217ENST00000482647 NPIPA5A0A0B4J1W7 369 aa19■□□□□ 0.63
SEC13-217ENST00000482647 WIPF3A6NGB9 483 aa19■□□□□ 0.63
SEC13-217ENST00000482647 B4DXG7 233 aa19■□□□□ 0.63
SEC13-217ENST00000482647 NPIPA7E9PJI5 369 aa19■□□□□ 0.63
SEC13-217ENST00000482647 E9PLN8 166 aa19■□□□□ 0.63
SEC13-217ENST00000482647 CLIC1O00299 241 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ANGPT2O15123 496 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ZIC3O60481 467 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ACTL6AO96019 429 aa19■□□□□ 0.63
SEC13-217ENST00000482647 LDLRP01130 860 aa19■□□□□ 0.63
SEC13-217ENST00000482647 SNRPB2P08579 225 aaKnown RBP19■□□□□ 0.63
SEC13-217ENST00000482647 NPIPA8P0DM63 369 aa19■□□□□ 0.63
SEC13-217ENST00000482647 CD1EP15812 388 aa19■□□□□ 0.63
SEC13-217ENST00000482647 MVDP53602 400 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ZNF630Q2M218 657 aaPredicted RBP19■□□□□ 0.63
SEC13-217ENST00000482647 GPAT3Q53EU6 434 aa19■□□□□ 0.63
SEC13-217ENST00000482647 LRIF1Q5T3J3 769 aa19■□□□□ 0.63
SEC13-217ENST00000482647 AP1ARQ63HQ0 302 aa19■□□□□ 0.63
SEC13-217ENST00000482647 VASNQ6EMK4 673 aa19■□□□□ 0.63
SEC13-217ENST00000482647 AAGABQ6PD74 315 aa19■□□□□ 0.63
SEC13-217ENST00000482647 IFNEQ86WN2 208 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ABTB1Q969K4 478 aaPredicted RBP19■□□□□ 0.63
SEC13-217ENST00000482647 AURKBQ96GD4 344 aaPredicted RBP19■□□□□ 0.63
SEC13-217ENST00000482647 TIMP4Q99727 224 aa19■□□□□ 0.63
SEC13-217ENST00000482647 VKORC1Q9BQB6 163 aa19■□□□□ 0.63
SEC13-217ENST00000482647 SAR1AQ9NR31 198 aa19■□□□□ 0.63
SEC13-217ENST00000482647 SLAMF8Q9P0V8 285 aa19■□□□□ 0.63
SEC13-217ENST00000482647 ZNF407Q9C0G0 2248 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 FIGNL2A6NMB9 653 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 NR2F1P10589 423 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 BMP7P18075 431 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 SEC24CP53992 1094 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 GYS2P54840 703 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 ZNF141Q15928 474 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 EMC4Q5J8M3 183 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 TYW3Q6IPR3 259 aaKnown RBP18.99■□□□□ 0.63
SEC13-217ENST00000482647 ZNF585AQ6P3V2 769 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 C3P1Q6ZMU1 363 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 ZNF614Q8N883 585 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 PHOSPHO1Q8TCT1 267 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 OIT3Q8WWZ8 545 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 C1GALT1C1Q96EU7 318 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 SAP130Q9H0E3 1048 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 SLC25A37Q9NYZ2 338 aa18.99■□□□□ 0.63
SEC13-217ENST00000482647 PRAMEF27A3QJZ7 478 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 GMNCA6NCL1 334 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 GTPBP1O00178 669 aaKnown RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 HCRTR2O43614 444 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 H6PDO95479 791 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 HOXD4P09016 255 aaPredicted RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 ETFAP13804 333 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 HOXB9P17482 250 aaPredicted RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 HK1P19367 917 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 PPIBP23284 216 aaKnown RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 LSP1P33241 339 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 DSTNP60981 165 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 CRYZQ08257 329 aaKnown RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 FUT5Q11128 374 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 CD226Q15762 336 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 SYPL1Q16563 259 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 GLYR1Q49A26 553 aaPredicted RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 PDZK1Q5T2W1 519 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms