RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SCMH1Q96GD3 660 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF583Q96ND8 569 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TMEM38AQ9H6F2 299 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TRIM45Q9H8W5 580 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 UBQLN4Q9NRR5 601 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 NDE1Q9NXR1 346 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CALML5Q9NZT1 146 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 PPP4R1LQ9P1A2 415 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TMEM181Q9P2C4 612 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 EGFL7Q9UHF1 273 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 KCNE5Q9UJ90 142 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 GMEB1Q9Y692 573 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 MPDZO75970 2070 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 GYG2O15488 501 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 NDUFB5O43674 189 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 FADS1O60427 444 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 UGT2B17O75795 530 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 SORBS2O94875 1100 aaKnown RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 SOX30O94993 753 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 PGM3O95394 542 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ANGPTL1O95841 491 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 CNR1P21554 472 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 TBXA2RP21731 343 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 PCGF2P35227 344 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 MAGEA8P43361 318 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 CLK3P49761 638 aaKnown RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 CCR4P51679 360 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ATP12AP54707 1039 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 BNIP1Q12981 228 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 GNA13Q14344 377 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 TOMM20Q15388 145 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 CD226Q15762 336 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 VMACQ2NL98 169 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 NET1Q7Z628 596 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF843Q8N446 348 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF527Q8NB42 609 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 OR52P1PQ8NH57 321 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 BBS10Q8TAM1 723 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 FIG4Q92562 907 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 REXO5Q96IC2 774 aaKnown RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 THTPAQ9BU02 230 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 TSPAN10Q9H1Z9 355 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-208ENST00000482310 TAS2R1Q9NYW7 299 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 ABCD2Q9UBJ2 740 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 WIF1Q9Y5W5 379 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
HDAC1-208ENST00000482310 MED12Q93074 2177 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ELOVL7A1L3X0 281 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 PRORSD1PA6NEY8 169 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 KLRC4-KLRK1H3BQV0 150 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 OIP5O43482 229 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 RASAL1O95294 804 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 SFTPCP11686 197 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 C19orf57Q0VDD7 668 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 KLRB1Q12918 225 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF836Q6ZNA1 936 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 PACS2Q86VP3 889 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 PEX5LQ8IYB4 626 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 Q8NA96 180 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 SMYD1Q8NB12 490 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 SLC26A7Q8TE54 656 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 DUSP19Q8WTR2 217 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 PNPLA2Q96AD5 504 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 CCDC124Q96CT7 223 aaKnown RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 SPATA9Q9BWV2 254 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ANGPTL4Q9BY76 406 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 HOXD1Q9GZZ0 328 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 MED11Q9P086 117 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ABCG2Q9UNQ0 655 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF443Q9Y2A4 671 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-208ENST00000482310 CARD8Q9Y2G2 431 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 DTNAQ9Y4J8 743 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF462Q96JM2 2506 aa12.09□□□□□ -0.47
HDAC1-208ENST00000482310 A0A0G2JPF8 293 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 SERINC4A6NH21 518 aa12.08□□□□□ -0.48
HDAC1-208ENST00000482310 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms