RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TACC2O95359 2948 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 H3BNH8 94 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 OXSR1O95747 527 aaPredicted RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 IGKV1D-16P01601 117 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 LAMP1P11279 417 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 ATP6V1C1P21283 382 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 CCT3P49368 545 aaKnown RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 ZNF41P51814 821 aaPredicted RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 AGFG1P52594 562 aaKnown RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 POU6F2P78424 691 aaPredicted RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 FOXF2Q12947 444 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 TP53BP2Q13625 1128 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 PTGR1Q14914 329 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 DUSP5Q16690 384 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 TMEM44Q2T9K0 475 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 CDC73Q6P1J9 531 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 WDR75Q8IWA0 830 aaKnown RBP13.59□□□□□ -0.23
PRKN-207ENST00000479615 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 OR7A2PQ8NGA2 310 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 OR4C3Q8NH37 302 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 SFXN5Q8TD22 340 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 ADAMTS15Q8TE58 950 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 JADE3Q92613 823 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 ACTRT3Q9BYD9 372 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 ELOVL5Q9NYP7 299 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 FLRT3Q9NZU0 649 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 RAP2CQ9Y3L5 183 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 SNX8Q9Y5X2 465 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 POLQO75417 2590 aa13.59□□□□□ -0.23
PRKN-207ENST00000479615 CSMD2Q7Z408 3487 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 A0A1W2PNV4 684 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 B4DXG7 233 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 CASKO14936 926 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 TNFSF13O75888 250 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 ACP2P11117 423 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 CREB1P16220 341 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 EIF1P41567 113 aaKnown RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 RPL14P50914 215 aaKnown RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 CLDN8P56748 225 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 LASP1Q14847 261 aaKnown RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 SGCBQ16585 318 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 PDSS1Q5T2R2 415 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 FBXW10Q5XX13 1052 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 FIGNL1Q6PIW4 674 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 APOOLQ6UXV4 268 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 EXOC3L1Q86VI1 746 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 RIMKLAQ8IXN7 391 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 UBQLNLQ8IYU4 475 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 GTPBP8Q8N3Z3 284 aaPredicted RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 C3orf30Q96M34 536 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 DUSP26Q9BV47 211 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 RNF122Q9H9V4 155 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 GLRX2Q9NS18 164 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
PRKN-207ENST00000479615 PCDHGB4Q9UN71 923 aa13.58□□□□□ -0.24
PRKN-207ENST00000479615 H3BML4 177 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 TGM6O95932 706 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 AK1P00568 194 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 CD8BP10966 210 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 ME2P23368 584 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 ADH6P28332 368 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 ARRB2P32121 409 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 SUMO3P55854 103 aaPredicted RBP13.57□□□□□ -0.24
PRKN-207ENST00000479615 RAC1P63000 192 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 CHI3L2Q15782 390 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 GTF2IRD2BQ6EKJ0 949 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 LUZP2Q86TE4 346 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 GTF2IRD2Q86UP8 949 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 CHDHQ8NE62 594 aaPredicted RBP13.57□□□□□ -0.24
PRKN-207ENST00000479615 PGM2Q96G03 612 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 C16orf58Q96GQ5 468 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 FOXC2Q99958 501 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 GPATCH1Q9BRR8 931 aaKnown RBP13.57□□□□□ -0.24
PRKN-207ENST00000479615 YIPF4Q9BSR8 244 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 FANCFQ9NPI8 374 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 GALNT8Q9NY28 637 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 ST6GALNAC2Q9UJ37 374 aa13.57□□□□□ -0.24
PRKN-207ENST00000479615 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 ANKRD17O75179 2603 aaKnown RBP13.56□□□□□ -0.24
PRKN-207ENST00000479615 RNASET2O00584 256 aaKnown RBP13.56□□□□□ -0.24
PRKN-207ENST00000479615 CFLARO15519 480 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 SEC14L5O43304 696 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 AGR2O95994 175 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 DHRS4L1P0CG22 281 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 G6PDP11413 515 aa13.56□□□□□ -0.24
PRKN-207ENST00000479615 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms