RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CLDN8P56748 225 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LRRC74AQ0VAA2 488 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 AIMP2Q13155 320 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 IL10RAQ13651 578 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ATP1A4Q13733 1029 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ELAVL1Q15717 326 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 MOGQ16653 247 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ST3GAL2Q16842 350 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 DEFB109BQ30KR1 87 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LSM12Q3MHD2 195 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SLC9B1Q4ZJI4 515 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ATAD3BQ5T9A4 648 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CPTPQ5TA50 214 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 VWA5B1Q5TIE3 1220 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ANXA8L1Q5VT79 327 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 AGAP7PQ5VUJ5 663 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 FAM219BQ5XKK7 198 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CTRB2Q6GPI1 263 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 PAPD4Q6PIY7 484 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LANCL3Q6ZV70 420 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 PPP1R32Q7Z5V6 425 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SATL1Q86VE3 508 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 TICAM1Q8IUC6 712 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 KBTBD2Q8IY47 623 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 MIER2Q8N344 545 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LRRC25Q8N386 305 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LSMEM1Q8N8F7 131 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 GLB1L3Q8NCI6 653 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 OR14A16Q8NHC5 309 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CLHC1Q8NHS4 586 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SUN5Q8TC36 379 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ADAMTS17Q8TE56 1095 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 TSLPQ969D9 159 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 TRIM63Q969Q1 353 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 EXOSC8Q96B26 276 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 C8orf44Q96CB5 159 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 NMD3Q96D46 503 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ZBED6CLQ96FA7 236 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF764Q96H86 408 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 BTBD2Q9BX70 525 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 TMEM120AQ9BXJ8 343 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF700Q9H0M5 742 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 OR10A5Q9H207 317 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF160Q9HCG1 818 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CPNE5Q9HCH3 593 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SLC35C2Q9NQQ7 365 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 NECTIN3Q9NQS3 549 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 AIG1Q9NVV5 245 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 P4HTMQ9NXG6 502 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SELENONQ9NZV5 590 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SH3BP4Q9P0V3 963 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 GIMAP2Q9UG22 337 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 BCAP29Q9UHQ4 241 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 FBXL4Q9UKA2 621 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 HS3ST3B1Q9Y662 390 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CEPT1Q9Y6K0 416 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SEC16AO15027 2179 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SPTBN2O15020 2390 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CROCCQ5TZA2 2017 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 IGKV3D-11A0A0A0MRZ8 115 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 A0A1W2PQ72 361 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ARGFXA6NJG6 315 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 A8MUA0 341 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 VSTM5A8MXK1 200 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 C17orf105B2RV13 164 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 H0Y3Z8 333 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 TAF4O00268 1085 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 SOCS6O14544 535 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF195O14628 629 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 PGRMC2O15173 223 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 PRKRAO75569 313 aaKnown RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 KRT75O95678 551 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ALPPP05187 535 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ZCCHC18P0CG32 403 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 COX6A1P12074 109 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 CPMP14384 443 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 NCF2P19878 526 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ITGA3P26006 1051 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 APEX1P27695 318 aaKnown RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ITPKBP27987 946 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 S100A3P33764 101 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 FEN1P39748 380 aaKnown RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 EIF2B2P49770 351 aaKnown RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ATP4BP51164 291 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 PGDP52209 483 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 NCBP2P52298 156 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 DIO3P55073 304 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 KCNK10P57789 538 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 C21orf58P58505 322 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 IGLV3-21P80748 117 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 ID2Q02363 134 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 SRSF6Q13247 344 aaKnown RBP5.73□□□□□ -1.49
SF3B1-209ENST00000479532 SQLEQ14534 574 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 PTGR1Q14914 329 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 BTBD16Q32M84 506 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 PGS1Q32NB8 556 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 NADK2Q4G0N4 442 aa5.73□□□□□ -1.49
SF3B1-209ENST00000479532 DCAF10Q5QP82 559 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms