RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NPIPA3F8WFD2 350 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 H3BNH8 94 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 NDUFB5O43674 189 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ESRRAP11474 423 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ACVR2AP27037 513 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 DPP4P27487 766 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-217ENST00000479161 CDKN2CP42773 168 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 SMSP52788 366 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF141Q15928 474 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 LRIF1Q5T3J3 769 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 AAGABQ6PD74 315 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ZAR1Q86SH2 424 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 MARCH3Q86UD3 253 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 OR4K17Q8NGC6 315 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 OR5D16Q8NGK9 328 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 RFWD2Q8NHY2 731 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 FBXO30Q8TB52 745 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 SPDL1Q96EA4 605 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 CHMP6Q96FZ7 201 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 CCDC120Q96HB5 630 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 MARK4Q96L34 752 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF317Q96PQ6 595 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-217ENST00000479161 TRNT1Q96Q11 434 aaKnown RBP14.06□□□□□ -0.16
C9orf3-217ENST00000479161 TIMP4Q99727 224 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 INPP5KQ9BT40 448 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 RTN4RQ9BZR6 473 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 SLC6A15Q9H2J7 730 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 EXO5Q9H790 373 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 FBXO34Q9NWN3 711 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 TAS2R10Q9NYW0 307 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 FLRT3Q9NZU0 649 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 DCTN4Q9UJW0 460 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 FBXL2Q9UKC9 423 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 HRH3Q9Y5N1 445 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 KCNE3Q9Y6H6 103 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 HEATR5AQ86XA9 2040 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 CACNA1CQ13936 2221 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 A0A096LPI6 279 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 A0A1W2PP18 115 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 B4DXG7 233 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 C9JVG2 144 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 HMGN4O00479 90 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 SCO2O43819 266 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 BMP2P12643 396 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 HOXB9P17482 250 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-217ENST00000479161 DCTP40126 519 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 RFX3P48380 749 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 MVDP53602 400 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 SUMO3P55854 103 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-217ENST00000479161 GUCY1A3Q02108 690 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 ART3Q13508 389 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF630Q2M218 657 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-217ENST00000479161 TMEM44Q2T9K0 475 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 FLYWCH1Q4VC44 716 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 TIGD2Q4W5G0 525 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 EIPR1Q53HC9 387 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 CCNJQ5T5M9 372 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 ENPP6Q6UWR7 440 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 C16orf62Q7Z3J2 963 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 IFNEQ86WN2 208 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 TOR1AIP2Q8NFQ8 470 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 ABTB1Q969K4 478 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-217ENST00000479161 VPS33AQ96AX1 596 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 C1GALT1C1Q96EU7 318 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 DSN1Q9H410 356 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 RAD21L1Q9H4I0 556 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 FGFR1OP2Q9NVK5 253 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 CCDC167Q9P0B6 97 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 DTNAQ9Y4J8 743 aa14.05□□□□□ -0.16
C9orf3-217ENST00000479161 A0A0G2JND7 137 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 EIF4E2O60573 245 aaKnown RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 DNAJA2O60884 412 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 ANP32DO95626 131 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 VIMP08670 466 aaKnown RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 OR12D1P0DN82 309 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 BMP7P18075 431 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 PPIBP23284 216 aaKnown RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 RPS26P62854 115 aaKnown RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 FADDQ13158 208 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 WIPI1Q5MNZ9 446 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 LRRC74BQ6ZQY2 392 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 RNF130Q86XS8 419 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 CLEC4FQ8N1N0 589 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 DPP10Q8N608 796 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 OR14L1PQ8NHC6 308 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 XAGE5Q8WWM1 108 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 ITLN2Q8WWU7 325 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 ROPN1LQ96C74 230 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 UGT2B28Q9BY64 529 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 KLHL14Q9P2G3 628 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 PCDHB14Q9Y5E9 798 aa14.04□□□□□ -0.16
C9orf3-217ENST00000479161 KLF2Q9Y5W3 355 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-217ENST00000479161 C15orf38-AP3S2A0A0A6YYH1 394 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms