RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ST3GAL3Q11203 375 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF155Q12901 538 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 FZD5Q13467 585 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 NDUFA9Q16795 377 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 KLHL22Q53GT1 634 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 C3orf38Q5JPI3 329 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 C1QTNF12Q5T7M4 302 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 FCRL6Q6DN72 434 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 RASSF6Q6ZTQ3 369 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF438Q7Z4V0 828 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZAR1Q86SH2 424 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 LRRC25Q8N386 305 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 SIRT6Q8N6T7 355 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF485Q8NCK3 441 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 PIGXQ8TBF5 258 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 BMFQ96LC9 184 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF649Q9BS31 505 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 TTTY10Q9BZA0 68 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 TCEAL2Q9H3H9 227 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 B3GAT2Q9NPZ5 323 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 HINT3Q9NQE9 182 aaKnown RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 PCDHGB2Q9Y5G2 931 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 IQCMA0A1B0GVH7 501 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CCDC182A6NF36 153 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 OR2W5A6NFC9 320 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 B4DXG7 233 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GUCY1B2O75343 617 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 PSKH1P11801 424 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 HOXB2P14652 356 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 MAKP20794 623 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GSTM3P21266 225 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SLC9A3P48764 834 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 ZNF136P52737 540 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 FXYD6P3P58550 94 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 BNC1Q01954 994 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS52-217ENST00000478934 RAB40BQ12829 278 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 IL18Q14116 193 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 PLK5Q496M5 336 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 MINDY4Q4G0A6 757 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SLC25A30Q5SVS4 291 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 DDI2Q5TDH0 399 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 AADACL4Q5VUY2 407 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CNIH2Q6PI25 160 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 KLBQ86Z14 1044 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 POGLUT1Q8NBL1 392 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 OR51G2Q8NGK0 314 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SPRYD4Q8WW59 207 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 UFD1Q92890 307 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 TMEM246Q9BRR3 403 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SIRT4Q9Y6E7 314 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 COLEC10Q9Y6Z7 277 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CENPXA8MT69 81 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 KDM4EB2RXH2 506 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 SLC30A4O14863 429 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 POLR1CO15160 346 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 IL1AP01583 271 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CELA2BP08218 269 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 CT62P0C5K7 136 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 LAMP2P13473 410 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 UGT2B7P16662 529 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 TBXA2RP21731 343 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CTBP2P56545 445 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GPR18Q14330 331 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GNA13Q14344 377 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SHHQ15465 462 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CEBPEQ15744 281 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SNAP47Q5SQN1 464 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 FAM27D1Q5T7N8 215 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 VASNQ6EMK4 673 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GDPGP1Q6ZNW5 385 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 DGAT2L6Q6ZPD8 337 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 MARCH9Q86YJ5 346 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 OR4K14Q8NGD5 310 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 ACOT11Q8WXI4 607 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 SENP5Q96HI0 755 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 DEPDC7Q96QD5 511 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 SLC38A2Q96QD8 506 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 GFM1Q96RP9 751 aaKnown RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 SDF2Q99470 211 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 ARHGAP9Q9BRR9 750 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 RBCK1Q9BYM8 510 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 FGF20Q9NP95 211 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 OBP2AQ9NY56 170 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 CBLCQ9ULV8 474 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 BRWD1Q9NSI6 2320 aa10.06□□□□□ -0.8
VPS52-217ENST00000478934 TP53BP1Q12888 1972 aaPredicted RBP10.06□□□□□ -0.8
VPS52-217ENST00000478934 GXYLT2A0PJZ3 443 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 FGF17O60258 216 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 REM1O75628 298 aa10.05□□□□□ -0.8
VPS52-217ENST00000478934 CLUP10909 449 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms