RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 OR4Q2P0C623 313 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 SRD5A2P31213 254 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 FEN1P39748 380 aaKnown RBP4.1□□□□□ -1.75
CCDC171-207ENST00000478913 FRKP42685 505 aaPredicted RBP4.1□□□□□ -1.75
CCDC171-207ENST00000478913 AKAP17AQ02040 695 aaKnown RBP4.1□□□□□ -1.75
CCDC171-207ENST00000478913 MAPK11Q15759 364 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 TYSND1Q2T9J0 566 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 PM20D1Q6GTS8 502 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 SLC27A4Q6P1M0 643 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 C3P1Q6ZMU1 363 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 GBP6Q6ZN66 633 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 ITIH5Q86UX2 942 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 CDC20BQ86Y33 519 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 DND1Q8IYX4 353 aaKnown RBP4.1□□□□□ -1.75
CCDC171-207ENST00000478913 CNNM3Q8NE01 707 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 OR52B6Q8NGF0 335 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 GDAP1Q8TB36 358 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 PAPOLGQ9BWT3 736 aaKnown RBP4.1□□□□□ -1.75
CCDC171-207ENST00000478913 UBXN6Q9BZV1 441 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 GPR173Q9NS66 373 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 AGPAT5Q9NUQ2 364 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 IL17CQ9P0M4 197 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 KLK11Q9UBX7 282 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 KCNN3Q9UGI6 736 aa4.1□□□□□ -1.75
CCDC171-207ENST00000478913 ANKDD1BA6NHY2 528 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 ARGFXA6NJG6 315 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 ZNF732B4DXR9 585 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 SLC33A1O00400 549 aaPredicted RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 SIGLEC5O15389 551 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 GRAP2O75791 330 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 TGDSO95455 350 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 POLR2MP0CAP2 368 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 C8orf89P0DMQ9 161 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 KRT5P13647 590 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 EDNRAP25101 427 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 NDST2P52849 883 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 POU5F1Q01860 360 aaKnown RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 RAPSNQ13702 412 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 NFE2L1Q14494 772 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 QRICH1Q2TAL8 776 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 POM121L1PQ3SYA9 428 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 PAQR6Q6TCH4 344 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 C17orf107Q6ZR85 190 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 Q6ZVQ6 151 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 TMEM150AQ86TG1 271 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 GTSCR1Q86UQ5 136 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 MYPOPQ86VE0 399 aaPredicted RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 TMEM99Q8N816 258 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 OR5M9Q8NGP3 310 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 MIPOL1Q8TD10 442 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 GANCQ8TET4 914 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 SCFD1Q8WVM8 642 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 MRPS31Q92665 395 aaKnown RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 ATP6V1E2Q96A05 226 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 TMEM159Q96B96 161 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 SLC39A8Q9C0K1 460 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 LHX5Q9H2C1 402 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 CUEDC2Q9H467 287 aa4.09□□□□□ -1.75
CCDC171-207ENST00000478913 NXF3Q9H4D5 531 aaKnown RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 GPN1Q9HCN4 374 aaPredicted RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 DNAJC17Q9NVM6 304 aaKnown RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 LEF1Q9UJU2 399 aaPredicted RBP4.09□□□□□ -1.75
CCDC171-207ENST00000478913 ANK1P16157 1881 aa4.09□□□□□ -1.76
CCDC171-207ENST00000478913 COL27A1Q8IZC6 1860 aaPredicted RBP4.09□□□□□ -1.76
CCDC171-207ENST00000478913 DOCK5Q9H7D0 1870 aa4.09□□□□□ -1.76
CCDC171-207ENST00000478913 IGHV3OR16-10A0A075B7F0 116 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 A0A0U1RQK1 487 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ZNF320A2RRD8 509 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CCDC162PA2VCL2 907 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 SLC7A4O43246 635 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 TRAPPC3O43617 180 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 OBSL1O75147 1896 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CRCPO75575 148 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 NXPH4O95158 308 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 SLC16A8O95907 504 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 PKLRP30613 574 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CTNNA1P35221 906 aaKnown RBP4.08□□□□□ -1.76
CCDC171-207ENST00000478913 SLC26A2P50443 739 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ERVK-16P61578 105 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ST8SIA6P61647 398 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 MS4A2Q01362 244 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CNTN1Q12860 1018 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
CCDC171-207ENST00000478913 C16orf72Q14CZ0 275 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 DEFB133Q30KQ1 61 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CD300LGQ6UXG3 332 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 AQP12AQ8IXF9 295 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CLYBLQ8N0X4 340 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 FDCSPQ8NFU4 85 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 FIBINQ8TAL6 211 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 CA5BP1Q8WTZ4 195 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ANP32BQ92688 251 aaKnown RBP4.08□□□□□ -1.76
CCDC171-207ENST00000478913 ART4Q93070 314 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 RFT1Q96AA3 541 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 NAP1L5Q96NT1 182 aaPredicted RBP4.08□□□□□ -1.76
CCDC171-207ENST00000478913 RASL10BQ96S79 203 aa4.08□□□□□ -1.76
CCDC171-207ENST00000478913 NUDT9Q9BW91 350 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms