RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM231Q9H6L2 316 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 WDR41Q9HAD4 459 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 SLC25A19Q9HC21 320 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 NGBQ9NPG2 151 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 STARD5Q9NSY2 213 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 DEPPQ9NTK1 212 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 MIOXQ9UGB7 285 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TUBGCP4Q9UGJ1 667 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 IL20RAQ9UHF4 553 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 C2orf16Q68DN1 1984 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 DENND4CQ5VZ89 1909 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PLXNA3P51805 1871 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ESYT2A0FGR8 921 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 HAS3O00219 553 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 SH2D1BO14796 132 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PLEKHA8P1O95397 391 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 TIMP1P01033 207 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PROS1P07225 676 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 POLR2MP0CAP2 368 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 RALAP11233 206 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 CD1DP15813 335 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 FUT1P19526 365 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PSMA5P28066 241 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PTPN4P29074 926 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 DEKP35659 375 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 NPY2RP49146 381 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC8A3P57103 927 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC26A5P58743 744 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 SNAP25P60880 206 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 FUT7Q11130 342 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ENPP2Q13822 863 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 KARSQ15046 597 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ECSCRQ19T08 205 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 POM121L1PQ3SYA9 428 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ACSF3Q4G176 576 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 C2CD6Q53TS8 623 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 STEAP1BQ6NZ63 245 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 BLOC1S2Q6QNY1 142 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 FAM131BQ86XD5 332 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 LINC00518Q8N0U6 118 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 Q8NBF4 154 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC148Q8NFR7 591 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 OR1K1Q8NGR3 316 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 OR1B1Q8NGR6 318 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 OR4F5Q8NH21 305 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PPTC7Q8NI37 304 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 FBXO25Q8TCJ0 367 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC12Q8WUD4 166 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 PHYHIPQ92561 330 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC51Q96ER9 411 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 RCHY1Q96PM5 261 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 TNFRSF13CQ96RJ3 184 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 NDUFAF3Q9BU61 184 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 WRAP53Q9BUR4 548 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 STRADBQ9C0K7 418 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 NACA2Q9H009 215 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 MOB1AQ9H8S9 216 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ECT2Q9H8V3 914 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF490Q9ULM2 529 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 KLHDC2Q9Y2U9 406 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC6A5Q9Y345 797 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF175Q9Y473 711 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 TSC2P49815 1807 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 RANBP2P49792 3224 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 VWA8A3KMH1 1905 aa3.27□□□□□ -1.89
CDC42BPA-212ENST00000478573 GRIN2DO15399 1336 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NFASCO94856 1347 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 PRRC2BQ5JSZ5 2229 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF638Q14966 1978 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 A0A0A6YYD4 124 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 KLF18A0A0U1RQI7 1052 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 RGSL1A5PLK6 1076 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGLON5A6NGN9 336 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NEDD8-MDP1E9PL57 170 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 F8WDY8 70 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 ADAM12O43184 909 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF749O43361 778 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 PTBP3O95758 552 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 FOSL2P15408 326 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 TMOD1P28289 359 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 RPS4XP62701 263 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 BEX3Q00994 111 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 GABPB1Q06547 395 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 CEBPEQ15744 281 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 HKDC1Q2TB90 917 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 MUC21Q5SSG8 566 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 LIPKQ5VXJ0 399 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 WDR25Q64LD2 544 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 CXCL17Q6UXB2 119 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 UNC5DQ6UXZ4 953 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 FAM43BQ6ZT52 329 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 TMEM26Q6ZUK4 368 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NIPA1Q7RTP0 329 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 RANBP3LQ86VV4 465 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 AMZ2Q86W34 360 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF781Q8N8C0 355 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms