RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PRDM6Q9NQX0 595 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 RASSF1Q9NS23 344 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 LANCL2Q9NS86 450 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 FGF21Q9NSA1 209 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SELENONQ9NZV5 590 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 RHCGQ9UBD6 479 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CBLCQ9ULV8 474 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 BAIAP2Q9UQB8 552 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 GPR55Q9Y2T6 319 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 OR10H1Q9Y4A9 318 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 PCDHGB2Q9Y5G2 931 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CLDN16Q9Y5I7 305 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CLCA3PQ9Y6N3 262 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SNRNP200O75643 2136 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 IGLV3-12A0A075B6K2 115 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 C2orf92A0A1B0GVN3 265 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 TCRBV16S1A1N1A0A5B0 115 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 FRG2CA6NGY1 282 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CPSF4LA6NMK7 179 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 C17orf105B2RV13 164 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 TO15178 435 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CHP2O43745 196 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 XPNPEP2O43895 674 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CNOT3O75175 753 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 OR6B1O95007 311 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 RCBTB2O95199 551 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 MED26O95402 600 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 IGF2P01344 180 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 NGFRP08138 427 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CKMT1AP12532 417 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 FOLR1P15328 257 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CCNA2P20248 432 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 PCMT1P22061 227 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ALAS2P22557 587 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 MMP11P24347 488 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 EPHA2P29317 976 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 FMO3P31513 532 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 PTGER1P34995 402 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 OMPP47874 163 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 GIPRP48546 466 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 PCYT1AP49585 367 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 SEPHS1P49903 392 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ZNF136P52737 540 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 MAT1AQ00266 395 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 ROR2Q01974 943 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 CFHR1Q03591 330 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 EMX1Q04741 257 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 FGFBP1Q14512 234 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 IL11RAQ14626 422 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 EXOSC7Q15024 291 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 NCF4Q15080 339 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ARHGAP40Q5TG30 622 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 TSSK4Q6SA08 328 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ISLR2Q6UXK2 745 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 TMPRSS11FQ6ZWK6 438 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 NUP54Q7Z3B4 507 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 GDF7Q7Z4P5 450 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ANKRD13BQ86YJ7 626 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 TMEM151BQ8IW70 566 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CLIP4Q8N3C7 705 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 STX19Q8N4C7 294 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 Q8N9G6 341 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 DTWD2Q8NBA8 298 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 C16orf52Q8NHV5 167 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 DNAJA4Q8WW22 397 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 APH1BQ8WW43 257 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 PIK3R3Q92569 461 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 RFKQ969G6 155 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 NMD3Q96D46 503 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 ZG16BQ96DA0 208 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 SENP5Q96HI0 755 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 CNPPD1Q9BV87 410 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CDCA4Q9BXL8 241 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 RSPO3Q9BXY4 272 aaPredicted RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 SLC7A5P2Q9GIP4 190 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 QRSL1Q9H0R6 528 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 GAREM1Q9H706 876 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ANKRA2Q9H9E1 313 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ACOT13Q9NPJ3 140 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 NECTIN3Q9NQS3 549 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 EXOSC3Q9NQT5 275 aaKnown RBP7.35□□□□□ -1.23
VMA21-203ENST00000477649 UBQLN4Q9NRR5 601 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 SEMA4GQ9NTN9 838 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ZNF226Q9NYT6 803 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 IL20Q9NYY1 176 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 COPS7AQ9UBW8 275 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 RARRES3Q9UL19 164 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 ERVK-19Q9WJR5 959 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CHST2Q9Y4C5 530 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 PCDHGA5Q9Y5G8 931 aa7.35□□□□□ -1.23
VMA21-203ENST00000477649 CLDN24A6NM45 220 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SLC22A1O15245 554 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 KLF4O43474 513 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SIGLEC6O43699 453 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TPST2O60704 377 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 PPM1BO75688 479 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms