RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LATO43561 262 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OR10H3O60404 316 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SCN2BO60939 215 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 STK17BO94768 372 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ARHGEF15O94989 841 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CCNB2O95067 398 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OAZ2O95190 189 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MED26O95402 600 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CLDN7O95471 211 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CLDN9O95484 217 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TTLL1O95922 423 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 VTNP04004 478 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 H1F0P07305 194 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DCNP07585 359 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RPSAP08865 295 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ACAA1P09110 424 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FGF5P12034 268 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DARSP14868 501 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ETS2P15036 469 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NQO2P16083 231 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TSPAN8P19075 237 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TCN1P20061 433 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 STOMP27105 288 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PSMB6P28072 239 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 IL12BP29460 328 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OXTRP30559 389 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SRD5A2P31213 254 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 HOXA9P31269 272 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 HNRNPH1P31943 449 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 EVI2BP34910 448 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FOLR3P41439 243 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PPP3CCP48454 512 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NPY2RP49146 381 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 POU3F4P49335 361 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ARRB1P49407 418 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 GDI2P50395 445 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CSRP3P50461 194 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NDST2P52849 883 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ACLYP53396 1101 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CDH12P55289 794 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TAS2R38P59533 333 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PLP1P60201 277 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PRPS1P60891 318 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 VBP1P61758 197 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RPS6P62753 249 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 GUCY1B3Q02153 619 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 GHRHRQ02643 423 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SRYQ05066 204 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RAD51Q06609 339 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PNRC1Q12796 327 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 STX3Q13277 289 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CEACAM7Q14002 265 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CYTH1Q15438 398 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ETFDHQ16134 617 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CDKN3Q16667 212 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 EIF2S3LQ2VIR3 472 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SNAI3Q3KNW1 292 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PTPN20Q4JDL3 420 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF542PQ5EBM4 170 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MTX3Q5HYI7 312 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CEP78Q5JTW2 689 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ENTPD8Q5MY95 495 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OTUD3Q5T2D3 398 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DDI2Q5TDH0 399 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NDUFAF5Q5TEU4 345 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 LCN1P1Q5VSP4 162 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 C1orf189Q5VU69 101 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF470Q6ECI4 717 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 C1orf94Q6P1W5 598 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DPY19L2P2Q6ZN68 376 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PLEKHG7Q6ZR37 379 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ARCQ7LC44 396 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SHFQ7M4L6 423 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF367Q7RTV3 350 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SPRED1Q7Z699 444 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TFAP2DQ7Z6R9 452 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 KMT5CQ86Y97 462 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PTOV1Q86YD1 416 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TBC1D10CQ8IV04 446 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MMAAQ8IVH4 418 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NAGSQ8N159 534 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FBXL16Q8N461 479 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TEX26Q8N6G2 289 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC57Q8N9N7 239 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NPEPL1Q8NDH3 523 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 C7orf57Q8NEG2 295 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 STXBP6Q8NFX7 210 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OR2L3Q8NG85 312 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OR9G4Q8NGQ1 327 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OR52I2Q8NH67 350 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 UBA3Q8TBC4 463 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM163Q8TC26 289 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FANK1Q8TC84 345 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SLC35F5Q8WV83 523 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 P3H4Q92791 437 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TANKQ92844 425 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RPL3LQ92901 407 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 C8orf44Q96CB5 159 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MBD6Q96DN6 1003 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ASB9Q96DX5 294 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms