RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NXNL2Q5VZ03 156 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CCBE1Q6UXH8 406 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF620Q6ZNG0 422 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 GDPD3Q7L5L3 318 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 RNF113BQ8IZP6 322 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF619Q8N2I2 560 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 SHDQ96IW2 340 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 STACQ99469 402 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 COQ7Q99807 217 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF350Q9GZX5 532 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 TBC1D17Q9HA65 648 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 DUSP22Q9NRW4 184 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 H2AFY2Q9P0M6 372 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 EXOGQ9Y2C4 368 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 KNL1Q8NG31 2342 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 EML5Q05BV3 1969 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 SPTY2D1-AS1A0A0U1RR47 76 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 OR6C74A6NCV1 312 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 C2orf74A8MZ97 194 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CHST10O43529 356 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 PLOD3O60568 738 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 STX11O75558 287 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 AK1P00568 194 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 THY1P04216 161 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ATP1B1P05026 303 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 RPS4Y1P22090 263 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 GABRA5P31644 462 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 TMED10P49755 219 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ACSM1Q08AH1 577 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ILF3Q12906 894 aaKnown RBP eCLIP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 FZD2Q14332 565 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 PGGHGQ32M88 737 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CLEC12AQ5QGZ9 265 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 EXOSC6Q5RKV6 272 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 FHL5Q5TD97 284 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 OR2G6Q5TZ20 316 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 SLC30A6Q6NXT4 461 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 DGLUCYQ7Z3D6 616 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 MEX3DQ86XN8 651 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CDRT4Q8N9R6 151 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 OR4Q3Q8NH05 313 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 GATAD2BQ8WXI9 593 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ASB15Q8WXK1 588 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 EVA1AQ9H8M9 152 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 GPR27Q9NS67 375 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CAB39Q9Y376 341 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CEP192Q8TEP8 1941 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 TRAPPC13A5PLN9 417 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 SOX30O94993 753 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 TNFP01375 233 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 LIMS3P0CW19 117 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 LIMS4P0CW20 117 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 GAAP10253 952 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 SLC1A3P43003 542 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 HOXC5Q00444 222 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 CD300CQ08708 224 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 GPR18Q14330 331 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 FLYWCH1Q4VC44 716 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 DESI1Q6ICB0 168 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 OR4N5Q8IXE1 308 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 ABCA7Q8IZY2 2146 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 PSD4Q8NDX1 1056 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 OR10G6Q8NH81 332 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 TMEM255BQ8WV15 326 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 TM9SF4Q92544 642 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 AP3S1Q92572 193 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 C1GALT1C1Q96EU7 318 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 JAM3Q9BX67 310 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 POT1Q9NUX5 634 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 ERVK13-1Q9NX77 482 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 SLC7A7Q9UM01 511 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 V9GYH0 126 aa15.3■□□□□ 0.04
TMEM53-208ENST00000476724 PLD2O14939 933 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 FMO6PO60774 539 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 MAOBP27338 520 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 HTR1FP30939 366 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF136P52737 540 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 TRMT12Q53H54 448 aaKnown RBP15.29■□□□□ 0.04
TMEM53-208ENST00000476724 C22orf42Q6IC83 251 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 CD200R1LQ6Q8B3 271 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 QSOX2Q6ZRP7 698 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 OR8H2Q8N162 312 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF485Q8NCK3 441 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 BAHD1Q8TBE0 780 aaPredicted RBP15.29■□□□□ 0.04
TMEM53-208ENST00000476724 GPR151Q8TDV0 419 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 TPK1Q9H3S4 243 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 IL21RQ9HBE5 538 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 NTNG1Q9Y2I2 539 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 PCDHGB2Q9Y5G2 931 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 LOC105369274A0A096LPK9 316 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 TRDV1A0A1B0GX56 115 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 H0YGG7 62 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 GPR75O95800 540 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 WNT1P04628 370 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 GPR4P46093 362 aa15.29■□□□□ 0.04
TMEM53-208ENST00000476724 ARF3P61204 181 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms