RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 POLE3Q9NRF9 147 aa13.14□□□□□ -0.31
ABCF3-211ENST00000475728 COQ3Q9NZJ6 369 aa13.14□□□□□ -0.31
ABCF3-211ENST00000475728 FLRT3Q9NZU0 649 aa13.14□□□□□ -0.31
ABCF3-211ENST00000475728 DCTN4Q9UJW0 460 aa13.14□□□□□ -0.31
ABCF3-211ENST00000475728 FBXL2Q9UKC9 423 aa13.14□□□□□ -0.31
ABCF3-211ENST00000475728 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 NINQ8N4C6 2090 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 ADAM10O14672 748 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 VIMP08670 466 aaKnown RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 BMP7P18075 431 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 CHMP24386 653 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 DCTP40126 519 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 HPCAP84074 193 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 CRYZQ08257 329 aaKnown RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 RCAN2Q14206 197 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 ARHGAP11BQ3KRB8 267 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 C6orf10Q5SRN2 563 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 METTL21CQ5VZV1 264 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 TNFAIP8L2Q6P589 184 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 MAMDC2Q7Z304 686 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 CLEC4FQ8N1N0 589 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 XAGE5Q8WWM1 108 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 ITLN2Q8WWU7 325 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-211ENST00000475728 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 RND1Q92730 232 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 SFXN2Q96NB2 322 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 SDF2Q99470 211 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 TIMP4Q99727 224 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 UGT2B28Q9BY64 529 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 CCDC134Q9H6E4 229 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 ALKBH4Q9NXW9 302 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 MED11Q9P086 117 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 LIPT1Q9Y234 373 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 KCNE3Q9Y6H6 103 aa13.13□□□□□ -0.31
ABCF3-211ENST00000475728 EML6Q6ZMW3 1958 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 DIDO1Q9BTC0 2240 aaKnown RBP13.12□□□□□ -0.31
ABCF3-211ENST00000475728 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 A0A087WZY1 265 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 A0A0G2JND7 137 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 RNF224P0DH78 156 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 OR12D1P0DN82 309 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 NCF2P19878 526 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-211ENST00000475728 ART3Q13508 389 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 C1orf185Q5T7R7 199 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 APOOLQ6UXV4 268 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 ZAR1Q86SH2 424 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 RNF130Q86XS8 419 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 ULK2Q8IYT8 1036 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 PMM1Q92871 262 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 C1GALT1C1Q96EU7 318 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 THOC1Q96FV9 657 aaKnown RBP13.12□□□□□ -0.31
ABCF3-211ENST00000475728 PIGQQ9BRB3 760 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 SERHL2Q9H4I8 314 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 FBXO34Q9NWN3 711 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 THUMPD1Q9NXG2 353 aaKnown RBP13.12□□□□□ -0.31
ABCF3-211ENST00000475728 TNFRSF10DQ9UBN6 386 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-211ENST00000475728 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
ABCF3-211ENST00000475728 NPIPB9F8W1W9 429 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 GTPBP1O00178 669 aaKnown RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 NR5A2O00482 541 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 ZIC3O60481 467 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 GSNP06396 782 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 CPN1P15169 458 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 HK1P19367 917 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 MDH1P40925 334 aaKnown RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 CDKN2CP42773 168 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 ZFP36L2P47974 494 aaKnown RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 GFRA1P56159 465 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 ADORA2A-AS1P86434 159 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 BCL2A1Q16548 175 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 AGKQ53H12 422 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 B4GALNT2Q8NHY0 566 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 PHOSPHO1Q8TCT1 267 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 ROPN1LQ96C74 230 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 TRNT1Q96Q11 434 aaKnown RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 RTN4RQ9BZR6 473 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 CCDC167Q9P0B6 97 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 DTNAQ9Y4J8 743 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
ABCF3-211ENST00000475728 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-211ENST00000475728 DNAJC13O75165 2243 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms