RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PCGF2P35227 344 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 PMP22Q01453 160 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 NFATC3Q12968 1075 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 MAPK14Q16539 360 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 KLHL26Q53HC5 615 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 FNDC7Q5VTL7 733 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 REEP3Q6NUK4 255 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 C16orf89Q6UX73 402 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 RINLQ6ZS11 566 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 MARCH3Q86UD3 253 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 ZNF527Q8NB42 609 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 HIPK4Q8NE63 616 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 BBS10Q8TAM1 723 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 ZG16BQ96DA0 208 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 ZNF597Q96LX8 424 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 TAAR6Q96RI8 345 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 QRSL1Q9H0R6 528 aaKnown RBP20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 MTHFD2LQ9H903 347 aaPredicted RBP20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 SUCOQ9UBS9 1254 aaKnown RBP20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 USP22Q9UPT9 525 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 HRH3Q9Y5N1 445 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 SPTA1P02549 2419 aa20.27■□□□□ 0.84
MCF2L2-209ENST00000475664 AGAP5A6NIR3 686 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 LRRC3CA6NJW4 275 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 SNPHO15079 494 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 RASAL1O95294 804 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 HPGDP15428 266 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 RPS4Y1P22090 263 aaKnown RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 CLK3P49761 638 aaKnown RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 EEFSECP57772 596 aaKnown RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 LIPEQ05469 1076 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 INPP5JQ15735 1006 aaPredicted RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 VMACQ2NL98 169 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 PDZK1Q5T2W1 519 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 PACS2Q86VP3 889 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 GMPR2Q9P2T1 348 aaKnown RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 ANAPC2Q9UJX6 822 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 BOKQ9UMX3 212 aaPredicted RBP20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 ANGPT4Q9Y264 503 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 DTNAQ9Y4J8 743 aa20.26■□□□□ 0.83
MCF2L2-209ENST00000475664 C2orf72A6NCS6 295 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 C17orf51A8MQB3 221 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 GLSO94925 669 aaPredicted RBP20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 ANGPTL1O95841 491 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 MASP1P48740 699 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 GSK3BP49841 420 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 PCBP3P57721 371 aaKnown RBP20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 BNIP1Q12981 228 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 CD226Q15762 336 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 ERICH5Q6P6B1 374 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 HMGN2P46Q86SG4 172 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 SLC30A8Q8IWU4 369 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 DEFB107AQ8IZN7 70 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 OR2T12Q8NG77 320 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 ZFP64Q9NPA5 681 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 NCKAP5O14513 1909 aa20.25■□□□□ 0.83
MCF2L2-209ENST00000475664 COL6A6A6NMZ7 2263 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 SERINC4A6NH21 518 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 B4DXG7 233 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 NDUFB5O43674 189 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 ETS2P15036 469 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 RFC3P40938 356 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 HYAL4Q2M3T9 481 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 SOWAHCQ53LP3 525 aaPredicted RBP20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 TIGD3Q6B0B8 471 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 IFNEQ86WN2 208 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 MICU2Q8IYU8 434 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 ZNF614Q8N883 585 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 WDSUB1Q8N9V3 476 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 GATSQ8NAP1 163 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 TTTY12Q9BZ98 90 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 C1orf21Q9H246 121 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 ALG2Q9H553 416 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 SDHAF3Q9NRP4 125 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 TAS2R1Q9NYW7 299 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 ADA2Q9NZK5 511 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 NTNG1Q9Y2I2 539 aa20.24■□□□□ 0.83
MCF2L2-209ENST00000475664 IGLV3-32A0A0A0MS00 114 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 GNB5O14775 395 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 DNAJA2O60884 412 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 GCM2O75603 506 aaPredicted RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 DBIP07108 87 aaKnown RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 ELAVL4P26378 380 aaKnown RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 ADH7P40394 386 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 RNF144AP50876 292 aaPredicted RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 C17orf67Q0P5P2 114 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 VEZF1Q14119 521 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 FGFBP1Q14512 234 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 RNFT1Q5M7Z0 435 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 MISPQ8IVT2 679 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 PEX5LQ8IYB4 626 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 DUSP19Q8WTR2 217 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 SLC7A6OSQ96CW6 309 aaPredicted RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 JSRP1Q96MG2 331 aaPredicted RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 PPP4R1LQ9P1A2 415 aa20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 GPC6Q9Y625 555 aaPredicted RBP20.23■□□□□ 0.83
MCF2L2-209ENST00000475664 PCNX3Q9H6A9 2034 aa20.22■□□□□ 0.83
MCF2L2-209ENST00000475664 ELOVL7A1L3X0 281 aa20.22■□□□□ 0.83
MCF2L2-209ENST00000475664 PRORSD1PA6NEY8 169 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms