RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 DNAJA1P31689 397 aaKnown RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PIGAP37287 484 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 IFNGR2P38484 337 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 MAGEA2P43356 314 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PTDSS1P48651 473 aaKnown RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 TMED10P49755 219 aaKnown RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 GSK3AP49840 483 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PGDP52209 483 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 HMGA2P52926 109 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PNLIPRP2P54317 469 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ATP12AP54707 1039 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 MLLT10P55197 1068 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SLC37A1P57057 533 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 MRPS35P82673 323 aaKnown RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ID2Q02363 134 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 RFX4Q33E94 735 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 LIN52Q52LA3 116 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 LRRC23Q53EV4 343 aaPredicted RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SFT2D3Q587I9 215 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF311Q5JNZ3 666 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 DCST2Q5T1A1 773 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PRAMEF17Q5VTA0 474 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 JMJD6Q6NYC1 403 aaPredicted RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 FAM180BQ6P0A1 224 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 LYPD8Q6UX82 237 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZBTB49Q6ZSB9 765 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 COX15Q7KZN9 410 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF550Q7Z398 422 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 NUP54Q7Z3B4 507 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ANKRD37Q7Z713 158 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 RAB43Q86YS6 212 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZDHHC21Q8IVQ6 265 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 MISPQ8IVT2 679 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 METTL27Q8N6F8 245 aaPredicted RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 GALNT11Q8NCW6 608 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ICA1LQ8NDH6 482 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 OR52P1PQ8NH57 321 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 OR5K1Q8NHB7 308 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 FBXO30Q8TB52 745 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SLC2A12Q8TD20 617 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF721Q8TF20 911 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 DNAJC9Q8WXX5 260 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 RAB8BQ92930 207 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 MAL2Q969L2 176 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 EME1Q96AY2 570 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 TMCO6Q96DC7 493 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 C16orf58Q96GQ5 468 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 COL21A1Q96P44 957 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SEPHS2Q99611 448 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 OR8D2Q9GZM6 311 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF350Q9GZX5 532 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF700Q9H0M5 742 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ANKRD19PQ9H560 264 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 APMAPQ9HDC9 416 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SDHAF3Q9NRP4 125 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 AGPAT4Q9NRZ5 378 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ERVK-19Q9WJR5 959 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 PTRH2Q9Y3E5 179 aaKnown RBP6.49□□□□□ -1.37
SHQ1-207ENST00000475558 LRRC42Q9Y546 428 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ORC6Q9Y5N6 252 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ENPP4Q9Y6X5 453 aa6.49□□□□□ -1.37
SHQ1-207ENST00000475558 ITPR2Q14571 2701 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 A8MUI8 341 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 G3V2T6 193 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 H0Y3Z8 333 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 AP3D1O14617 1153 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 KLF7O75840 302 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SORBS2O94875 1100 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 KCNK2O95069 426 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PRSS23O95084 383 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TIAF1O95411 115 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DDAH2O95865 285 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PABPC4LP0CB38 370 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ANXA8P13928 327 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ACADSP16219 412 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 CDH2P19022 906 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ATP6V1B2P21281 511 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TBXA2RP21731 343 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 GPR143P51810 404 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 KCNJ10P78508 379 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PSG6Q00889 435 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DUSP2Q05923 314 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF155Q12901 538 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TRIP10Q15642 601 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 LTB4RQ15722 352 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF141Q15928 474 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SYPL1Q16563 259 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DUSP5Q16690 384 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PLAG1Q6DJT9 500 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 HIST2H2BCQ6DN03 193 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 OR2T5Q6IEZ7 315 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PPP4R4Q6NUP7 873 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PAPD4Q6PIY7 484 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 ASB18Q6ZVZ8 466 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TIPARPQ7Z3E1 657 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 GRAMD2AQ8IUY3 354 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms